Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 AL451085.2-201ENST00000605085 799 ntBASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI3Q3KNW1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 AC009299.2-201ENST00000482477 511 ntBASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNAI3Q3KNW1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 DUSP8P3-201ENST00000399571 1760 ntBASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.58■□□□□ 0.73
SNAI3Q3KNW1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI3Q3KNW1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SNAI3Q3KNW1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI3Q3KNW1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SNAI3Q3KNW1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SNAI3Q3KNW1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI3Q3KNW1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 KRT125P-201ENST00000546827 989 ntBASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 Z92544.1-202ENST00000571933 1220 ntBASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAI3Q3KNW1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 AC239859.2-201ENST00000444165 318 ntBASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 AC092028.1-203ENST00000608262 953 ntBASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.56■□□□□ 0.72
SNAI3Q3KNW1 AC079630.1-202ENST00000618127 1840 ntBASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 MIR6722-201ENST00000617286 78 ntBASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SNAI3Q3KNW1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 MIR4787-201ENST00000607364 84 ntBASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI3Q3KNW1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms