Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 AC139795.1-202ENST00000500444 432 ntBASIC19.89■□□□□ 0.77
ODF4Q2M2E3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 AL117328.2-201ENST00000624617 1940 ntBASIC19.89■□□□□ 0.77
ODF4Q2M2E3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ODF4Q2M2E3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
ODF4Q2M2E3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ODF4Q2M2E3 EP400NL-214ENST00000641289 2402 ntBASIC19.87■□□□□ 0.77
ODF4Q2M2E3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ODF4Q2M2E3 AC131274.2-201ENST00000580697 1507 ntBASIC19.86■□□□□ 0.77
ODF4Q2M2E3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ODF4Q2M2E3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 AC011551.1-201ENST00000614101 683 ntBASIC19.85■□□□□ 0.77
ODF4Q2M2E3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ODF4Q2M2E3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 ALDH1A3-203ENST00000557963 1670 ntBASIC19.84■□□□□ 0.77
ODF4Q2M2E3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF4Q2M2E3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 BHLHE23-202ENST00000612929 1109 ntBASIC19.83■□□□□ 0.77
ODF4Q2M2E3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.83■□□□□ 0.77
ODF4Q2M2E3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.83■□□□□ 0.76
ODF4Q2M2E3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.83■□□□□ 0.76
ODF4Q2M2E3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ODF4Q2M2E3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms