Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC3P53804 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TTC3P53804 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC3P53804 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC3P53804 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.54■■□□□ 1.52
TTC3P53804 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.54■■□□□ 1.52
TTC3P53804 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
TTC3P53804 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
TTC3P53804 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
TTC3P53804 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TTC3P53804 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.53■■□□□ 1.52
TTC3P53804 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TTC3P53804 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
TTC3P53804 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TTC3P53804 HLA-L-211ENST00000482052 1765 ntBASIC24.53■■□□□ 1.52
TTC3P53804 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC3P53804 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.52■■□□□ 1.52
TTC3P53804 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.52■■□□□ 1.52
TTC3P53804 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC3P53804 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.52■■□□□ 1.52
TTC3P53804 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC3P53804 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC3P53804 AC027612.3-201ENST00000413684 1047 ntBASIC24.52■■□□□ 1.52
TTC3P53804 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.52■■□□□ 1.52
TTC3P53804 AC126544.1-201ENST00000580842 1059 ntBASIC24.52■■□□□ 1.52
TTC3P53804 AL031602.1-201ENST00000633169 911 ntBASIC24.52■■□□□ 1.52
TTC3P53804 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC3P53804 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC3P53804 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC3P53804 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC3P53804 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC3P53804 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC3P53804 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TTC3P53804 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TTC3P53804 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC3P53804 IKBKGP1-201ENST00000612193 1073 ntBASIC24.51■■□□□ 1.51
TTC3P53804 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC3P53804 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC3P53804 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
TTC3P53804 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC3P53804 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 ALDH1A3-203ENST00000557963 1670 ntBASIC24.49■■□□□ 1.51
TTC3P53804 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L2-201ENST00000561772 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 pRNA.6-201ENST00000610482 90 ntBASIC24.49■■□□□ 1.51
TTC3P53804 pRNA.5-201ENST00000612139 90 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.49■■□□□ 1.51
TTC3P53804 pRNA.11-201ENST00000618423 90 ntBASIC24.49■■□□□ 1.51
TTC3P53804 pRNA.13-201ENST00000619112 90 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L6-201ENST00000626483 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L1-201ENST00000627662 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L8-201ENST00000629013 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L3-201ENST00000630187 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L7-201ENST00000630678 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 DUX4L5-201ENST00000630834 1275 ntBASIC24.49■■□□□ 1.51
TTC3P53804 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
TTC3P53804 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC3P53804 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
TTC3P53804 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
TTC3P53804 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC3P53804 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC3P53804 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC3P53804 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC3P53804 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC3P53804 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
TTC3P53804 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.47■■□□□ 1.51
TTC3P53804 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.47■■□□□ 1.51
TTC3P53804 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.47■■□□□ 1.51
TTC3P53804 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC3P53804 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC3P53804 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.47■■□□□ 1.51
TTC3P53804 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC3P53804 KRT18P5-201ENST00000436075 1291 ntBASIC24.47■■□□□ 1.51
TTC3P53804 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.47■■□□□ 1.51
TTC3P53804 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC3P53804 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC3P53804 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC3P53804 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC3P53804 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.46■■□□□ 1.51
TTC3P53804 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.46■■□□□ 1.51
TTC3P53804 AC012414.1-201ENST00000556676 535 ntBASIC24.46■■□□□ 1.51
TTC3P53804 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.46■■□□□ 1.51
TTC3P53804 TSPY26P-201ENST00000476365 1326 ntBASIC24.46■■□□□ 1.51
TTC3P53804 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC3P53804 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC3P53804 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TTC3P53804 AC090192.1-201ENST00000517740 490 ntBASIC24.45■■□□□ 1.51
TTC3P53804 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.45■■□□□ 1.5
TTC3P53804 MIR572-201ENST00000384983 95 ntBASIC24.45■■□□□ 1.5
TTC3P53804 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.45■■□□□ 1.5
TTC3P53804 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.45■■□□□ 1.5
TTC3P53804 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC3P53804 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.44■■□□□ 1.5
TTC3P53804 AC141586.4-201ENST00000624558 1573 ntBASIC24.44■■□□□ 1.5
TTC3P53804 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms