Protein–RNA interactions for Protein: J3KQ70

INO80B-WBP1, HCG2039827, isoform CRA_e, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-WBP1J3KQ70 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 AC024257.2-201ENST00000549699 147 ntBASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.8■■□□□ 1.56
INO80B-WBP1J3KQ70 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 AC133561.4-201ENST00000566112 224 ntBASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 AC241377.3-202ENST00000626088 1088 ntBASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 AC241585.3-202ENST00000628937 1088 ntBASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 AC245100.8-202ENST00000629247 1058 ntBASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
INO80B-WBP1J3KQ70 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
INO80B-WBP1J3KQ70 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 SERBP1P1-201ENST00000396021 1160 ntBASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
INO80B-WBP1J3KQ70 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 AC006455.2-201ENST00000429931 906 ntBASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
INO80B-WBP1J3KQ70 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
INO80B-WBP1J3KQ70 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
INO80B-WBP1J3KQ70 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
INO80B-WBP1J3KQ70 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.75■■□□□ 1.55
INO80B-WBP1J3KQ70 AC009086.3-201ENST00000623486 1008 ntBASIC24.75■■□□□ 1.55
INO80B-WBP1J3KQ70 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.75■■□□□ 1.55
INO80B-WBP1J3KQ70 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.74■■□□□ 1.55
INO80B-WBP1J3KQ70 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.74■■□□□ 1.55
INO80B-WBP1J3KQ70 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
INO80B-WBP1J3KQ70 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
INO80B-WBP1J3KQ70 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
INO80B-WBP1J3KQ70 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
INO80B-WBP1J3KQ70 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.73■■□□□ 1.55
INO80B-WBP1J3KQ70 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 ABCB10P4-201ENST00000566803 2184 ntBASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
INO80B-WBP1J3KQ70 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.71■■□□□ 1.55
INO80B-WBP1J3KQ70 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
INO80B-WBP1J3KQ70 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.71■■□□□ 1.55
INO80B-WBP1J3KQ70 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.71■■□□□ 1.55
INO80B-WBP1J3KQ70 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
INO80B-WBP1J3KQ70 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
INO80B-WBP1J3KQ70 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.7■■□□□ 1.55
INO80B-WBP1J3KQ70 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.7■■□□□ 1.55
INO80B-WBP1J3KQ70 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
INO80B-WBP1J3KQ70 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
INO80B-WBP1J3KQ70 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms