Protein–RNA interactions for Protein: A6NNE9

MARCH11, E3 ubiquitin-protein ligase MARCH11, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH11A6NNE9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH11A6NNE9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MARCH11A6NNE9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MARCH11A6NNE9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MARCH11A6NNE9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MARCH11A6NNE9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MARCH11A6NNE9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MARCH11A6NNE9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MARCH11A6NNE9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MARCH11A6NNE9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 RNF165-205ENST00000588679 2904 ntBASIC18.31■□□□□ 0.52
MARCH11A6NNE9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.31■□□□□ 0.52
MARCH11A6NNE9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MARCH11A6NNE9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.29■□□□□ 0.52
MARCH11A6NNE9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MARCH11A6NNE9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MARCH11A6NNE9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MARCH11A6NNE9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms