Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MIR3621-201ENST00000580529 85 ntBASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV4S1A1TA0A5B7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV4S1A1TA0A5B7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV4S1A1TA0A5B7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 AL136116.3-201ENST00000402907 1138 ntBASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 AC131281.2-201ENST00000520478 145 ntBASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TCRBV4S1A1TA0A5B7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SNX5-217ENST00000606557 1087 ntBASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV4S1A1TA0A5B7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV4S1A1TA0A5B7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 MIR6722-201ENST00000617286 78 ntBASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV4S1A1TA0A5B7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV4S1A1TA0A5B7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TCRBV4S1A1TA0A5B7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV4S1A1TA0A5B7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms