Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 AC009831.1-201ENST00000580420 1582 ntBASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV13-1A0A0B4J241 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV13-1A0A0B4J241 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 RPS2P7-201ENST00000447334 885 ntBASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 AC018755.3-202ENST00000596210 929 ntBASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV13-1A0A0B4J241 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 C1orf229-201ENST00000623686 2258 ntBASIC15.63■□□□□ 0.09
TRAV13-1A0A0B4J241 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 EP400NL-214ENST00000641289 2402 ntBASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV13-1A0A0B4J241 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 AL161729.1-201ENST00000604104 1402 ntBASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 AC092068.2-201ENST00000590491 1708 ntBASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 AL592295.1-201ENST00000400984 884 ntBASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms