Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 AC004448.1-201ENST00000458332 883 ntBASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 AC021242.3-201ENST00000607598 1377 ntBASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV9A0A0B4J1U6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV9A0A0B4J1U6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 BX664725.1-201ENST00000438252 379 ntBASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 Z92544.1-202ENST00000571933 1220 ntBASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 ABCB10P4-201ENST00000566803 2184 ntBASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV9A0A0B4J1U6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV9A0A0B4J1U6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 AL451085.2-201ENST00000605085 799 ntBASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 SNX5-217ENST00000606557 1087 ntBASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV9A0A0B4J1U6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms