Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 SMPD5-203ENST00000639008 1464 ntBASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
RCL1Q9Y2P8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 AC060814.1-201ENST00000554326 538 ntBASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 AC242852.2-201ENST00000615738 1807 ntBASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms