Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 SMPD5-203ENST00000639008 1464 ntBASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCL1Q9Y2P8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.49■□□□□ 0.55
RCL1Q9Y2P8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCL1Q9Y2P8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.47■□□□□ 0.55
RCL1Q9Y2P8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCL1Q9Y2P8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
RCL1Q9Y2P8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 AC060814.1-201ENST00000554326 538 ntBASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCL1Q9Y2P8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.44■□□□□ 0.54
RCL1Q9Y2P8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RCL1Q9Y2P8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 AC242852.2-201ENST00000615738 1807 ntBASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms