Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF216Q9NWF9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
RNF216Q9NWF9 MIR935-201ENST00000401179 91 ntBASIC25.45■■□□□ 1.66
RNF216Q9NWF9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF216Q9NWF9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC25.45■■□□□ 1.66
RNF216Q9NWF9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.45■■□□□ 1.66
RNF216Q9NWF9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.45■■□□□ 1.66
RNF216Q9NWF9 AC004223.2-201ENST00000590309 544 ntBASIC25.45■■□□□ 1.66
RNF216Q9NWF9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.66
RNF216Q9NWF9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF216Q9NWF9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 AC133561.4-201ENST00000566112 224 ntBASIC25.44■■□□□ 1.66
RNF216Q9NWF9 RN7SL440P-201ENST00000577855 343 ntBASIC25.44■■□□□ 1.66
RNF216Q9NWF9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF216Q9NWF9 AC097639.1-201ENST00000565519 1891 ntBASIC25.43■■□□□ 1.66
RNF216Q9NWF9 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC25.43■■□□□ 1.66
RNF216Q9NWF9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.43■■□□□ 1.66
RNF216Q9NWF9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF216Q9NWF9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF216Q9NWF9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF216Q9NWF9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
RNF216Q9NWF9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
RNF216Q9NWF9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 SNX5-217ENST00000606557 1087 ntBASIC25.41■■□□□ 1.66
RNF216Q9NWF9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF216Q9NWF9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF216Q9NWF9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF216Q9NWF9 MIR4466-201ENST00000606121 54 ntBASIC25.4■■□□□ 1.66
RNF216Q9NWF9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.4■■□□□ 1.66
RNF216Q9NWF9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RNF216Q9NWF9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RNF216Q9NWF9 AL512631.2-201ENST00000604634 923 ntBASIC25.39■■□□□ 1.66
RNF216Q9NWF9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF216Q9NWF9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF216Q9NWF9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF216Q9NWF9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 AC096631.2-201ENST00000436136 790 ntBASIC25.38■■□□□ 1.65
RNF216Q9NWF9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 COA4-204ENST00000541455 1038 ntTSL 5 BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF216Q9NWF9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.37■■□□□ 1.65
RNF216Q9NWF9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF216Q9NWF9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF216Q9NWF9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF216Q9NWF9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF216Q9NWF9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF216Q9NWF9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms