RNA–Protein interactions for RNA: ENST00000577855.2

RN7SL440P-201, Transcript of RNA, 7SL, cytoplasmic 440, pseudogene, humanhuman

BASIC

Gene RN7SL440P, Length 343 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL440P-201ENST00000577855 AEBP2Q6ZN18 517 aaPredicted RBP38.47■■■■□ 3.75
RN7SL440P-201ENST00000577855 CHIC1Q5VXU3 224 aa37.33■■■■□ 3.57
RN7SL440P-201ENST00000577855 PHF23Q9BUL5 403 aaPredicted RBP32.87■■■□□ 2.85
RN7SL440P-201ENST00000577855 SENP3Q9H4L4 574 aaPredicted RBP32.58■■■□□ 2.81
RN7SL440P-201ENST00000577855 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
RN7SL440P-201ENST00000577855 FOXD1Q16676 465 aa30.33■■■□□ 2.45
RN7SL440P-201ENST00000577855 PLPPR3Q6T4P5 718 aa30.21■■■□□ 2.43
RN7SL440P-201ENST00000577855 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
RN7SL440P-201ENST00000577855 ADRA2BP18089 450 aa29.04■■■□□ 2.24
RN7SL440P-201ENST00000577855 ABCC9O60706 1549 aa28.82■■■□□ 2.2
RN7SL440P-201ENST00000577855 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
RN7SL440P-201ENST00000577855 PIAS4Q8N2W9 510 aaPredicted RBP28.55■■■□□ 2.16
RN7SL440P-201ENST00000577855 MSH5O43196 834 aa27.97■■■□□ 2.07
RN7SL440P-201ENST00000577855 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
RN7SL440P-201ENST00000577855 NACADO15069 1562 aa27.18■■□□□ 1.94
RN7SL440P-201ENST00000577855 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
RN7SL440P-201ENST00000577855 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
RN7SL440P-201ENST00000577855 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
RN7SL440P-201ENST00000577855 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
RN7SL440P-201ENST00000577855 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
RN7SL440P-201ENST00000577855 PPP4R3CPQ6ZMV5 832 aa26.64■■□□□ 1.86
RN7SL440P-201ENST00000577855 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
RN7SL440P-201ENST00000577855 SCAF1Q9H7N4 1312 aaKnown RBP26.45■■□□□ 1.83
RN7SL440P-201ENST00000577855 MAPK8IP2Q13387 824 aaPredicted RBP26.42■■□□□ 1.82
RN7SL440P-201ENST00000577855 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
RN7SL440P-201ENST00000577855 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
RN7SL440P-201ENST00000577855 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
RN7SL440P-201ENST00000577855 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
RN7SL440P-201ENST00000577855 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
RN7SL440P-201ENST00000577855 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
RN7SL440P-201ENST00000577855 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
RN7SL440P-201ENST00000577855 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
RN7SL440P-201ENST00000577855 CNKSR2Q8WXI2 1034 aa25.89■■□□□ 1.74
RN7SL440P-201ENST00000577855 KCNA4P22459 653 aa25.85■■□□□ 1.73
RN7SL440P-201ENST00000577855 POTEDQ86YR6 584 aa25.85■■□□□ 1.73
RN7SL440P-201ENST00000577855 NCBP3Q53F19 620 aaKnown RBP25.83■■□□□ 1.73
RN7SL440P-201ENST00000577855 NPM3O75607 178 aaKnown RBP25.53■■□□□ 1.68
RN7SL440P-201ENST00000577855 RNF216Q9NWF9 866 aaPredicted RBP25.44■■□□□ 1.66
RN7SL440P-201ENST00000577855 HOXD11P31277 338 aaPredicted RBP25.38■■□□□ 1.65
RN7SL440P-201ENST00000577855 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
RN7SL440P-201ENST00000577855 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
RN7SL440P-201ENST00000577855 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
RN7SL440P-201ENST00000577855 DCAF8L1A6NGE4 600 aa24.95■■□□□ 1.58
RN7SL440P-201ENST00000577855 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
RN7SL440P-201ENST00000577855 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
RN7SL440P-201ENST00000577855 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
RN7SL440P-201ENST00000577855 CUX2O14529 1486 aa24.92■■□□□ 1.58
RN7SL440P-201ENST00000577855 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
RN7SL440P-201ENST00000577855 BAZ1AQ9NRL2 1556 aaPredicted RBP24.79■■□□□ 1.56
RN7SL440P-201ENST00000577855 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
RN7SL440P-201ENST00000577855 NESP48681 1621 aa24.7■■□□□ 1.54
RN7SL440P-201ENST00000577855 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
RN7SL440P-201ENST00000577855 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
RN7SL440P-201ENST00000577855 SLC4A1APQ9BWU0 796 aaKnown RBP24.55■■□□□ 1.52
RN7SL440P-201ENST00000577855 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
RN7SL440P-201ENST00000577855 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
RN7SL440P-201ENST00000577855 KIF21AQ7Z4S6 1674 aa24.44■■□□□ 1.5
RN7SL440P-201ENST00000577855 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
RN7SL440P-201ENST00000577855 CADPSQ9ULU8 1353 aa24.28■■□□□ 1.48
RN7SL440P-201ENST00000577855 WIZO95785 1651 aa24.27■■□□□ 1.48
RN7SL440P-201ENST00000577855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.47
RN7SL440P-201ENST00000577855 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
RN7SL440P-201ENST00000577855 SLC4A2P04920 1241 aa24.15■■□□□ 1.46
RN7SL440P-201ENST00000577855 WDR62O43379 1518 aa24.15■■□□□ 1.46
RN7SL440P-201ENST00000577855 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
RN7SL440P-201ENST00000577855 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
RN7SL440P-201ENST00000577855 RNF39Q9H2S5 420 aa23.98■■□□□ 1.43
RN7SL440P-201ENST00000577855 CFTRP13569 1480 aa23.98■■□□□ 1.43
RN7SL440P-201ENST00000577855 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
RN7SL440P-201ENST00000577855 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
RN7SL440P-201ENST00000577855 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
RN7SL440P-201ENST00000577855 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
RN7SL440P-201ENST00000577855 U3KPZ7 1027 aaPredicted RBP23.83■■□□□ 1.41
RN7SL440P-201ENST00000577855 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
RN7SL440P-201ENST00000577855 ZBTB22O15209 634 aa23.8■■□□□ 1.4
RN7SL440P-201ENST00000577855 FOXD4L1Q9NU39 408 aa23.79■■□□□ 1.4
RN7SL440P-201ENST00000577855 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
RN7SL440P-201ENST00000577855 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
RN7SL440P-201ENST00000577855 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
RN7SL440P-201ENST00000577855 C1QBPQ07021 282 aaKnown RBP23.64■■□□□ 1.37
RN7SL440P-201ENST00000577855 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
RN7SL440P-201ENST00000577855 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
RN7SL440P-201ENST00000577855 MYCNP04198 464 aaPredicted RBP23.55■■□□□ 1.36
RN7SL440P-201ENST00000577855 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
RN7SL440P-201ENST00000577855 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
RN7SL440P-201ENST00000577855 CACNB1Q02641 598 aaPredicted RBP23.5■■□□□ 1.35
RN7SL440P-201ENST00000577855 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
RN7SL440P-201ENST00000577855 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
RN7SL440P-201ENST00000577855 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
RN7SL440P-201ENST00000577855 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
RN7SL440P-201ENST00000577855 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
RN7SL440P-201ENST00000577855 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
RN7SL440P-201ENST00000577855 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
RN7SL440P-201ENST00000577855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
RN7SL440P-201ENST00000577855 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
RN7SL440P-201ENST00000577855 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
RN7SL440P-201ENST00000577855 CHD1O14646 1710 aa23.34■■□□□ 1.33
RN7SL440P-201ENST00000577855 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.32
RN7SL440P-201ENST00000577855 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
RN7SL440P-201ENST00000577855 SAMD1Q6SPF0 538 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms