RNA–Protein interactions for RNA: ENST00000541455.1

COA4-204, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

TSL 5 BASIC

Gene COA4, Length 1,038 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-204ENST00000541455 AEBP2Q6ZN18 517 aaPredicted RBP38.16■■■■□ 3.7
COA4-204ENST00000541455 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
COA4-204ENST00000541455 PHF23Q9BUL5 403 aaPredicted RBP32.91■■■□□ 2.86
COA4-204ENST00000541455 SENP3Q9H4L4 574 aaPredicted RBP32.2■■■□□ 2.75
COA4-204ENST00000541455 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
COA4-204ENST00000541455 FOXD1Q16676 465 aa29.99■■■□□ 2.39
COA4-204ENST00000541455 PPP6R1Q9UPN7 881 aa29.04■■■□□ 2.24
COA4-204ENST00000541455 ADRA2BP18089 450 aa29.03■■■□□ 2.24
COA4-204ENST00000541455 PIAS4Q8N2W9 510 aaPredicted RBP28.32■■■□□ 2.12
COA4-204ENST00000541455 MSH5O43196 834 aa27.46■■□□□ 1.99
COA4-204ENST00000541455 PPP4R3CPQ6ZMV5 832 aa26.8■■□□□ 1.88
COA4-204ENST00000541455 KCNA4P22459 653 aa26.41■■□□□ 1.82
COA4-204ENST00000541455 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
COA4-204ENST00000541455 MAPK8IP2Q13387 824 aaPredicted RBP26.33■■□□□ 1.81
COA4-204ENST00000541455 NCBP3Q53F19 620 aaKnown RBP26.03■■□□□ 1.76
COA4-204ENST00000541455 CNKSR2Q8WXI2 1034 aa25.95■■□□□ 1.74
COA4-204ENST00000541455 NPM3O75607 178 aaKnown RBP25.77■■□□□ 1.72
COA4-204ENST00000541455 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
COA4-204ENST00000541455 RNF216Q9NWF9 866 aaPredicted RBP25.38■■□□□ 1.65
COA4-204ENST00000541455 HOXD11P31277 338 aaPredicted RBP25.25■■□□□ 1.63
COA4-204ENST00000541455 SLC4A1APQ9BWU0 796 aaKnown RBP25.12■■□□□ 1.61
COA4-204ENST00000541455 POTEDQ86YR6 584 aa24.9■■□□□ 1.58
COA4-204ENST00000541455 DCAF8L1A6NGE4 600 aa24.8■■□□□ 1.56
COA4-204ENST00000541455 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
COA4-204ENST00000541455 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
COA4-204ENST00000541455 ZBTB22O15209 634 aa24.32■■□□□ 1.48
COA4-204ENST00000541455 SLC4A2P04920 1241 aa24.31■■□□□ 1.48
COA4-204ENST00000541455 CSRNP3Q8WYN3 585 aa24.25■■□□□ 1.47
COA4-204ENST00000541455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.16■■□□□ 1.465e-18■■■■■ 31.2
COA4-204ENST00000541455 FOXD4L1Q9NU39 408 aa24.16■■□□□ 1.46
COA4-204ENST00000541455 U3KPZ7 1027 aaPredicted RBP23.78■■□□□ 1.4
COA4-204ENST00000541455 MYCNP04198 464 aaPredicted RBP23.73■■□□□ 1.39
COA4-204ENST00000541455 RNF39Q9H2S5 420 aa23.6■■□□□ 1.37
COA4-204ENST00000541455 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
COA4-204ENST00000541455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
COA4-204ENST00000541455 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
COA4-204ENST00000541455 SAMD1Q6SPF0 538 aaPredicted RBP23.33■■□□□ 1.33
COA4-204ENST00000541455 C1QBPQ07021 282 aaKnown RBP23.26■■□□□ 1.31
COA4-204ENST00000541455 ATF5Q9Y2D1 282 aaPredicted RBP23.26■■□□□ 1.31
COA4-204ENST00000541455 ATXN8OSP0DMR3 200 aa23.18■■□□□ 1.3
COA4-204ENST00000541455 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
COA4-204ENST00000541455 APLP2Q06481 763 aa23.05■■□□□ 1.28
COA4-204ENST00000541455 CAPN15O75808 1086 aa23.02■■□□□ 1.28
COA4-204ENST00000541455 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
COA4-204ENST00000541455 CACNB1Q02641 598 aaPredicted RBP22.95■■□□□ 1.26
COA4-204ENST00000541455 ZNF219Q9P2Y4 722 aaPredicted RBP22.8■■□□□ 1.24
COA4-204ENST00000541455 ABCB7O75027 752 aa22.67■■□□□ 1.22
COA4-204ENST00000541455 POLA2Q14181 598 aa22.59■■□□□ 1.21
COA4-204ENST00000541455 DSG3P32926 999 aa22.54■■□□□ 1.2
COA4-204ENST00000541455 MKRN4PQ13434 485 aaPredicted RBP22.19■■□□□ 1.14
COA4-204ENST00000541455 FBLN2P98095 1184 aa22.11■■□□□ 1.13
COA4-204ENST00000541455 ZBTB12Q9Y330 459 aaPredicted RBP22.04■■□□□ 1.12
COA4-204ENST00000541455 FKBP8Q14318 412 aa21.95■■□□□ 1.1
COA4-204ENST00000541455 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
COA4-204ENST00000541455 SPDYE4A6NLX3 237 aa21.73■■□□□ 1.07
COA4-204ENST00000541455 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
COA4-204ENST00000541455 SPDYE2BA6NHP3 402 aa21.52■■□□□ 1.04
COA4-204ENST00000541455 SPDYE6P0CI01 402 aa21.52■■□□□ 1.04
COA4-204ENST00000541455 SPDYE2Q495Y8 402 aa21.52■■□□□ 1.04
COA4-204ENST00000541455 SSUH2Q9Y2M2 353 aa21.39■■□□□ 1.01
COA4-204ENST00000541455 RBM42Q9BTD8 480 aaKnown RBP21.36■■□□□ 1.01
COA4-204ENST00000541455 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
COA4-204ENST00000541455 PROM2Q8N271 834 aa21.28■■□□□ 1
COA4-204ENST00000541455 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
COA4-204ENST00000541455 REM2Q8IYK8 340 aaPredicted RBP21.04■□□□□ 0.96
COA4-204ENST00000541455 FBXO3Q9UK99 471 aa20.95■□□□□ 0.94
COA4-204ENST00000541455 CLEC11AQ9Y240 323 aa20.92■□□□□ 0.94
COA4-204ENST00000541455 SPDYE1Q8NFV5 336 aaPredicted RBP20.87■□□□□ 0.93
COA4-204ENST00000541455 PITPNM1O00562 1244 aa20.83■□□□□ 0.93
COA4-204ENST00000541455 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
COA4-204ENST00000541455 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
COA4-204ENST00000541455 VASPP50552 380 aaPredicted RBP20.77■□□□□ 0.92
COA4-204ENST00000541455 PRR29P0C7W0 189 aa20.67■□□□□ 0.9
COA4-204ENST00000541455 MIER1Q8N108 512 aa20.62■□□□□ 0.89
COA4-204ENST00000541455 PLCD3Q8N3E9 789 aa20.59■□□□□ 0.89
COA4-204ENST00000541455 IFNLR1Q8IU57 520 aaPredicted RBP20.54■□□□□ 0.88
COA4-204ENST00000541455 CHRDL2Q6WN34 429 aa20.52■□□□□ 0.88
COA4-204ENST00000541455 CREBZFQ9NS37 354 aa20.45■□□□□ 0.86
COA4-204ENST00000541455 KLHL34Q8N239 644 aa20.44■□□□□ 0.86
COA4-204ENST00000541455 CHADLQ6NUI6 762 aa20.43■□□□□ 0.86
COA4-204ENST00000541455 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
COA4-204ENST00000541455 FXR2P51116 673 aaKnown RBP eCLIP20.34■□□□□ 0.85
COA4-204ENST00000541455 PIP4P2Q8N4L2 257 aa20.33■□□□□ 0.85
COA4-204ENST00000541455 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
COA4-204ENST00000541455 MNX1P50219 401 aaPredicted RBP20.23■□□□□ 0.83
COA4-204ENST00000541455 SPOCK2Q92563 424 aa20.21■□□□□ 0.83
COA4-204ENST00000541455 RTN4Q9NQC3 1192 aaKnown RBP20.21■□□□□ 0.83
COA4-204ENST00000541455 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
COA4-204ENST00000541455 FARP1Q9Y4F1 1045 aaPredicted RBP20.13■□□□□ 0.81
COA4-204ENST00000541455 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
COA4-204ENST00000541455 NUBP1P53384 320 aa20.04■□□□□ 0.8
COA4-204ENST00000541455 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
COA4-204ENST00000541455 ABCC9O60706 1549 aa20.02■□□□□ 0.79
COA4-204ENST00000541455 RASEFQ8IZ41 740 aa19.97■□□□□ 0.79
COA4-204ENST00000541455 CIZ1Q9ULV3 898 aaPredicted RBP19.97■□□□□ 0.79
COA4-204ENST00000541455 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
COA4-204ENST00000541455 PKD2Q13563 968 aa19.89■□□□□ 0.77
COA4-204ENST00000541455 TSPYL2Q9H2G4 693 aaPredicted RBP19.87■□□□□ 0.77
COA4-204ENST00000541455 FAM212AQ96EL1 285 aa19.84■□□□□ 0.77
COA4-204ENST00000541455 GSE1Q14687 1217 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms