Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 UNC93B8-201ENST00000511903 705 ntBASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
BLOC1S4Q9NUP1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.35■■□□□ 1.65
BLOC1S4Q9NUP1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.34■■□□□ 1.65
BLOC1S4Q9NUP1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BLOC1S4Q9NUP1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
BLOC1S4Q9NUP1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
BLOC1S4Q9NUP1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
BLOC1S4Q9NUP1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 ANOS2P-203ENST00000472227 1816 ntBASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 GUSBP5-201ENST00000418136 578 ntBASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 TSPY9P-201ENST00000440215 945 ntBASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 TSPY11P-201ENST00000442607 1045 ntBASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
BLOC1S4Q9NUP1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
BLOC1S4Q9NUP1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BLOC1S4Q9NUP1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 MTDHP2-201ENST00000601468 714 ntBASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 AC010997.5-201ENST00000609182 354 ntBASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.31■■□□□ 1.64
BLOC1S4Q9NUP1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BLOC1S4Q9NUP1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BLOC1S4Q9NUP1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 AC005703.6-201ENST00000623265 1329 ntBASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BLOC1S4Q9NUP1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 AC092068.2-201ENST00000590491 1708 ntBASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 DUSP8P5-201ENST00000422884 1815 ntBASIC25.27■■□□□ 1.64
BLOC1S4Q9NUP1 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms