Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH15Q96QU1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH15Q96QU1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH15Q96QU1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH15Q96QU1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.38■■□□□ 1.17
PCDH15Q96QU1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 AC091060.1-201ENST00000623524 1766 ntBASIC22.38■■□□□ 1.17
PCDH15Q96QU1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDH15Q96QU1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 AL137784.2-201ENST00000607332 1000 ntBASIC22.37■■□□□ 1.17
PCDH15Q96QU1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
PCDH15Q96QU1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PCDH15Q96QU1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 AL022069.1-201ENST00000568025 1636 ntBASIC22.35■■□□□ 1.17
PCDH15Q96QU1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDH15Q96QU1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 AC012414.1-201ENST00000556676 535 ntBASIC22.34■■□□□ 1.17
PCDH15Q96QU1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH15Q96QU1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 TSPY26P-201ENST00000476365 1326 ntBASIC22.33■■□□□ 1.17
PCDH15Q96QU1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 AC126544.1-201ENST00000580842 1059 ntBASIC22.33■■□□□ 1.17
PCDH15Q96QU1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PCDH15Q96QU1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
PCDH15Q96QU1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDH15Q96QU1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDH15Q96QU1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH15Q96QU1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.31■■□□□ 1.16
PCDH15Q96QU1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH15Q96QU1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH15Q96QU1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH15Q96QU1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms