Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 C11orf96-202ENST00000528572 1834 ntBASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 RARRES2P7-201ENST00000567349 469 ntBASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.55■□□□□ 0.24
CHCHD1Q96BP2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 CAHM-201ENST00000604200 896 ntBASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 AC092667.1-201ENST00000434301 2586 ntBASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHCHD1Q96BP2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHCHD1Q96BP2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHCHD1Q96BP2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHCHD1Q96BP2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHCHD1Q96BP2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHCHD1Q96BP2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CHCHD1Q96BP2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 AC092053.2-201ENST00000640557 1818 ntBASIC16.52■□□□□ 0.23
CHCHD1Q96BP2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CHCHD1Q96BP2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHCHD1Q96BP2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 FBXW4P1-201ENST00000426721 2239 ntBASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms