Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC01555Q8NAE3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC01555Q8NAE3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01555Q8NAE3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.95■■□□□ 1.1
LINC01555Q8NAE3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01555Q8NAE3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01555Q8NAE3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC01555Q8NAE3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC01555Q8NAE3 AL512631.2-201ENST00000604634 923 ntBASIC21.94■■□□□ 1.1
LINC01555Q8NAE3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINC01555Q8NAE3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01555Q8NAE3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.93■■□□□ 1.1
LINC01555Q8NAE3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01555Q8NAE3 AC131281.2-201ENST00000520478 145 ntBASIC21.93■■□□□ 1.1
LINC01555Q8NAE3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01555Q8NAE3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01555Q8NAE3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01555Q8NAE3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01555Q8NAE3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 MIR4466-201ENST00000606121 54 ntBASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 AC009102.2-201ENST00000606772 1639 ntBASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.9■■□□□ 1.1
LINC01555Q8NAE3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.89■■□□□ 1.1
LINC01555Q8NAE3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
LINC01555Q8NAE3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01555Q8NAE3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
LINC01555Q8NAE3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01555Q8NAE3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01555Q8NAE3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01555Q8NAE3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms