Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 AC131274.2-201ENST00000580697 1507 ntBASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC32.4■■■□□ 2.78
LTBP4Q8N2S1 AC087239.1-201ENST00000622671 572 ntBASIC32.4■■■□□ 2.78
LTBP4Q8N2S1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
LTBP4Q8N2S1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
LTBP4Q8N2S1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC32.4■■■□□ 2.78
LTBP4Q8N2S1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC32.4■■■□□ 2.78
LTBP4Q8N2S1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.39■■■□□ 2.78
LTBP4Q8N2S1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTBP4Q8N2S1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.39■■■□□ 2.78
LTBP4Q8N2S1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
LTBP4Q8N2S1 AL050303.2-201ENST00000619798 666 ntBASIC32.39■■■□□ 2.78
LTBP4Q8N2S1 AC069152.1-201ENST00000438030 544 ntBASIC32.38■■■□□ 2.77
LTBP4Q8N2S1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
LTBP4Q8N2S1 DRD5P2-201ENST00000421395 2012 ntBASIC32.38■■■□□ 2.77
LTBP4Q8N2S1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
LTBP4Q8N2S1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.38■■■□□ 2.77
LTBP4Q8N2S1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 pRNA.6-201ENST00000610482 90 ntBASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 pRNA.5-201ENST00000612139 90 ntBASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 pRNA.11-201ENST00000618423 90 ntBASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 pRNA.13-201ENST00000619112 90 ntBASIC32.37■■■□□ 2.77
LTBP4Q8N2S1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC32.36■■■□□ 2.77
LTBP4Q8N2S1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
LTBP4Q8N2S1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC32.36■■■□□ 2.77
LTBP4Q8N2S1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC32.36■■■□□ 2.77
LTBP4Q8N2S1 TPRG1LP1-201ENST00000598702 760 ntBASIC32.36■■■□□ 2.77
LTBP4Q8N2S1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
LTBP4Q8N2S1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC32.35■■■□□ 2.77
LTBP4Q8N2S1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC32.35■■■□□ 2.77
LTBP4Q8N2S1 FAM201B-201ENST00000458407 597 ntBASIC32.35■■■□□ 2.77
LTBP4Q8N2S1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC32.35■■■□□ 2.77
LTBP4Q8N2S1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LTBP4Q8N2S1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
LTBP4Q8N2S1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.34■■■□□ 2.77
LTBP4Q8N2S1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LTBP4Q8N2S1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
LTBP4Q8N2S1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
LTBP4Q8N2S1 AP004607.4-201ENST00000530158 1459 ntBASIC32.32■■■□□ 2.77
LTBP4Q8N2S1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC32.32■■■□□ 2.76
LTBP4Q8N2S1 TSPY6P-201ENST00000448518 926 ntBASIC32.32■■■□□ 2.76
LTBP4Q8N2S1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC32.32■■■□□ 2.76
LTBP4Q8N2S1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
LTBP4Q8N2S1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 SLC7A5P2-201ENST00000553010 536 ntBASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
LTBP4Q8N2S1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
LTBP4Q8N2S1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.3■■■□□ 2.76
LTBP4Q8N2S1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC32.3■■■□□ 2.76
LTBP4Q8N2S1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
LTBP4Q8N2S1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
LTBP4Q8N2S1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.29■■■□□ 2.76
LTBP4Q8N2S1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 ITM2C-210ENST00000620962 501 ntBASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LTBP4Q8N2S1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 AL138781.1-201ENST00000566567 1274 ntBASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 AC004854.2-201ENST00000608450 1441 ntBASIC32.27■■■□□ 2.76
LTBP4Q8N2S1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
LTBP4Q8N2S1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC32.26■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms