Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR4497-201ENST00000583208 89 ntBASIC12.76□□□□□ -0.37
UBR4Q5T4S7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 AC073210.2-201ENST00000430369 194 ntBASIC12.76□□□□□ -0.37
UBR4Q5T4S7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AC092171.4-201ENST00000609130 632 ntBASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AC009102.2-201ENST00000606772 1639 ntBASIC12.75□□□□□ -0.37
UBR4Q5T4S7 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 LINC02228-203ENST00000641970 1355 ntBASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 AC126544.1-201ENST00000580842 1059 ntBASIC12.74□□□□□ -0.37
UBR4Q5T4S7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 LINC01023-201ENST00000606054 436 ntBASIC12.74□□□□□ -0.37
UBR4Q5T4S7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 IGHV3-19-201ENST00000521488 291 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 UNC93B4-201ENST00000505679 747 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 AC008550.1-201ENST00000511500 884 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 AL158047.1-201ENST00000445918 881 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 SLC7A5P1-201ENST00000568957 537 ntBASIC12.72□□□□□ -0.37
UBR4Q5T4S7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 AC128676.1-201ENST00000454392 318 ntBASIC12.71□□□□□ -0.37
UBR4Q5T4S7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 RCN1P1-201ENST00000400413 996 ntBASIC12.71□□□□□ -0.37
UBR4Q5T4S7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 AC131274.2-201ENST00000580697 1507 ntBASIC12.71□□□□□ -0.38
UBR4Q5T4S7 SLC29A4P1-201ENST00000398760 971 ntBASIC12.7□□□□□ -0.38
UBR4Q5T4S7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms