Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.11■■■□□ 2.57
USP6P35125 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.11■■■□□ 2.57
USP6P35125 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.11■■■□□ 2.57
USP6P35125 AC233992.3-201ENST00000607491 485 ntBASIC31.11■■■□□ 2.57
USP6P35125 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP6P35125 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
USP6P35125 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.1■■■□□ 2.57
USP6P35125 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.1■■■□□ 2.57
USP6P35125 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.1■■■□□ 2.57
USP6P35125 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP6P35125 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.1■■■□□ 2.57
USP6P35125 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.09■■■□□ 2.57
USP6P35125 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
USP6P35125 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
USP6P35125 ALDH1A3-203ENST00000557963 1670 ntBASIC31.08■■■□□ 2.57
USP6P35125 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.08■■■□□ 2.57
USP6P35125 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.08■■■□□ 2.57
USP6P35125 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.07■■■□□ 2.57
USP6P35125 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.07■■■□□ 2.57
USP6P35125 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.07■■■□□ 2.56
USP6P35125 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
USP6P35125 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.07■■■□□ 2.56
USP6P35125 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USP6P35125 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
USP6P35125 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.07■■■□□ 2.56
USP6P35125 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
USP6P35125 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP6P35125 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP6P35125 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP6P35125 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP6P35125 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP6P35125 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.06■■■□□ 2.56
USP6P35125 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.05■■■□□ 2.56
USP6P35125 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP6P35125 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP6P35125 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
USP6P35125 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP6P35125 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
USP6P35125 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.04■■■□□ 2.56
USP6P35125 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.04■■■□□ 2.56
USP6P35125 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
USP6P35125 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
USP6P35125 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
USP6P35125 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
USP6P35125 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
USP6P35125 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP6P35125 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC31.03■■■□□ 2.56
USP6P35125 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
USP6P35125 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.03■■■□□ 2.56
USP6P35125 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP6P35125 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.02■■■□□ 2.56
USP6P35125 pRNA.6-201ENST00000610482 90 ntBASIC31.02■■■□□ 2.56
USP6P35125 pRNA.5-201ENST00000612139 90 ntBASIC31.02■■■□□ 2.56
USP6P35125 pRNA.11-201ENST00000618423 90 ntBASIC31.02■■■□□ 2.56
USP6P35125 pRNA.13-201ENST00000619112 90 ntBASIC31.02■■■□□ 2.56
USP6P35125 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP6P35125 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
USP6P35125 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
USP6P35125 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
USP6P35125 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
USP6P35125 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.01■■■□□ 2.55
USP6P35125 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.01■■■□□ 2.55
USP6P35125 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.01■■■□□ 2.55
USP6P35125 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.01■■■□□ 2.55
USP6P35125 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.01■■■□□ 2.55
USP6P35125 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
USP6P35125 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
USP6P35125 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP6P35125 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP6P35125 GRAMD4P2-201ENST00000423297 1097 ntBASIC31■■■□□ 2.55
USP6P35125 SLC47A1P1-202ENST00000449666 945 ntBASIC31■■■□□ 2.55
USP6P35125 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31■■■□□ 2.55
USP6P35125 SP2-202ENST00000613139 908 ntTSL 5 BASIC31■■■□□ 2.55
USP6P35125 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31■■■□□ 2.55
USP6P35125 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USP6P35125 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
USP6P35125 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
USP6P35125 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP6P35125 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.98■■■□□ 2.55
USP6P35125 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.98■■■□□ 2.55
USP6P35125 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.98■■■□□ 2.55
USP6P35125 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
USP6P35125 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.97■■■□□ 2.55
USP6P35125 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
USP6P35125 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.97■■■□□ 2.55
USP6P35125 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.97■■■□□ 2.55
USP6P35125 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.97■■■□□ 2.55
USP6P35125 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
USP6P35125 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
USP6P35125 AC141586.4-201ENST00000624558 1573 ntBASIC30.96■■■□□ 2.55
USP6P35125 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
USP6P35125 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
USP6P35125 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
USP6P35125 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP6P35125 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms