Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCNAP12004 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.98■■□□□ 1.11
PCNAP12004 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.97■■□□□ 1.11
PCNAP12004 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.97■■□□□ 1.11
PCNAP12004 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCNAP12004 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.97■■□□□ 1.11
PCNAP12004 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.97■■□□□ 1.11
PCNAP12004 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.97■■□□□ 1.11
PCNAP12004 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCNAP12004 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.96■■□□□ 1.11
PCNAP12004 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 RARRES2P1-201ENST00000474487 481 ntBASIC21.96■■□□□ 1.11
PCNAP12004 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCNAP12004 C9orf163-202ENST00000624034 2573 ntBASIC21.95■■□□□ 1.11
PCNAP12004 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCNAP12004 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCNAP12004 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCNAP12004 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.95■■□□□ 1.1
PCNAP12004 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCNAP12004 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCNAP12004 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.95■■□□□ 1.1
PCNAP12004 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCNAP12004 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.95■■□□□ 1.1
PCNAP12004 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCNAP12004 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCNAP12004 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCNAP12004 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
PCNAP12004 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCNAP12004 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCNAP12004 ALDH1A3-203ENST00000557963 1670 ntBASIC21.94■■□□□ 1.1
PCNAP12004 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCNAP12004 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCNAP12004 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.93■■□□□ 1.1
PCNAP12004 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.93■■□□□ 1.1
PCNAP12004 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.93■■□□□ 1.1
PCNAP12004 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.93■■□□□ 1.1
PCNAP12004 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCNAP12004 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.92■■□□□ 1.1
PCNAP12004 AC137630.3-201ENST00000607245 391 ntBASIC21.92■■□□□ 1.1
PCNAP12004 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PCNAP12004 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNAP12004 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.91■■□□□ 1.1
PCNAP12004 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PCNAP12004 AC004448.1-201ENST00000458332 883 ntBASIC21.91■■□□□ 1.1
PCNAP12004 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.91■■□□□ 1.1
PCNAP12004 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PCNAP12004 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCNAP12004 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCNAP12004 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCNAP12004 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCNAP12004 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.9■■□□□ 1.1
PCNAP12004 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCNAP12004 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.9■■□□□ 1.1
PCNAP12004 BX664725.1-201ENST00000438252 379 ntBASIC21.9■■□□□ 1.1
PCNAP12004 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCNAP12004 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.9■■□□□ 1.1
PCNAP12004 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.9■■□□□ 1.1
PCNAP12004 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.9■■□□□ 1.1
PCNAP12004 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCNAP12004 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCNAP12004 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PCNAP12004 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCNAP12004 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.89■■□□□ 1.1
PCNAP12004 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCNAP12004 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCNAP12004 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCNAP12004 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCNAP12004 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCNAP12004 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.89■■□□□ 1.09
PCNAP12004 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCNAP12004 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms