Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSDP07339 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSDP07339 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSDP07339 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSDP07339 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
CTSDP07339 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.83■□□□□ 0.6
CTSDP07339 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTSDP07339 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.83■□□□□ 0.6
CTSDP07339 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSDP07339 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSDP07339 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSDP07339 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSDP07339 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSDP07339 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSDP07339 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSDP07339 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.82■□□□□ 0.6
CTSDP07339 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CTSDP07339 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSDP07339 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTSDP07339 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSDP07339 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSDP07339 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CTSDP07339 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSDP07339 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTSDP07339 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSDP07339 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSDP07339 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSDP07339 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSDP07339 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSDP07339 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSDP07339 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CTSDP07339 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 ESRRAP2-201ENST00000418437 1549 ntBASIC18.8■□□□□ 0.6
CTSDP07339 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.8■□□□□ 0.6
CTSDP07339 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.8■□□□□ 0.6
CTSDP07339 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.8■□□□□ 0.6
CTSDP07339 AC022413.1-201ENST00000624602 984 ntBASIC18.8■□□□□ 0.6
CTSDP07339 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSDP07339 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CTSDP07339 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSDP07339 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSDP07339 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTSDP07339 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSDP07339 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSDP07339 AC242852.2-201ENST00000615738 1807 ntBASIC18.79■□□□□ 0.6
CTSDP07339 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSDP07339 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSDP07339 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSDP07339 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTSDP07339 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSDP07339 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSDP07339 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTSDP07339 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSDP07339 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.78■□□□□ 0.6
CTSDP07339 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSDP07339 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSDP07339 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.78■□□□□ 0.6
CTSDP07339 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSDP07339 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTSDP07339 AL022069.1-201ENST00000568025 1636 ntBASIC18.78■□□□□ 0.6
CTSDP07339 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSDP07339 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSDP07339 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.77■□□□□ 0.59
CTSDP07339 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CTSDP07339 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTSDP07339 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTSDP07339 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.76■□□□□ 0.59
CTSDP07339 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.76■□□□□ 0.59
CTSDP07339 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms