Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 AC137630.3-201ENST00000607245 391 ntBASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 AC131274.2-201ENST00000580697 1507 ntBASIC17.98■□□□□ 0.47
TRBV9A0A0B4J1U6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 RARRES2P1-201ENST00000474487 481 ntBASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 AL117328.2-201ENST00000624617 1940 ntBASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV9A0A0B4J1U6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV9A0A0B4J1U6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRBV9A0A0B4J1U6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV9A0A0B4J1U6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV9A0A0B4J1U6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV9A0A0B4J1U6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV9A0A0B4J1U6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRBV9A0A0B4J1U6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms