Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.96■■■□□ 2.39
PCDH11XQ9BZA7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PCDH11XQ9BZA7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
PCDH11XQ9BZA7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.95■■■□□ 2.39
PCDH11XQ9BZA7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.95■■■□□ 2.39
PCDH11XQ9BZA7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
PCDH11XQ9BZA7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
PCDH11XQ9BZA7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.94■■■□□ 2.38
PCDH11XQ9BZA7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDH11XQ9BZA7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
PCDH11XQ9BZA7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC29.93■■■□□ 2.38
PCDH11XQ9BZA7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.93■■■□□ 2.38
PCDH11XQ9BZA7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.93■■■□□ 2.38
PCDH11XQ9BZA7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.93■■■□□ 2.38
PCDH11XQ9BZA7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDH11XQ9BZA7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDH11XQ9BZA7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDH11XQ9BZA7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDH11XQ9BZA7 AL161729.1-201ENST00000604104 1402 ntBASIC29.91■■■□□ 2.38
PCDH11XQ9BZA7 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.91■■■□□ 2.38
PCDH11XQ9BZA7 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.91■■■□□ 2.38
PCDH11XQ9BZA7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
PCDH11XQ9BZA7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDH11XQ9BZA7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.88■■■□□ 2.37
PCDH11XQ9BZA7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDH11XQ9BZA7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.86■■■□□ 2.37
PCDH11XQ9BZA7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDH11XQ9BZA7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDH11XQ9BZA7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 pRNA.6-201ENST00000610482 90 ntBASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 pRNA.5-201ENST00000612139 90 ntBASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 pRNA.11-201ENST00000618423 90 ntBASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 pRNA.13-201ENST00000619112 90 ntBASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PCDH11XQ9BZA7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms