Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHCHD1Q96BP2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHCHD1Q96BP2 AL359504.2-201ENST00000605506 1601 ntBASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHCHD1Q96BP2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CHCHD1Q96BP2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHCHD1Q96BP2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHCHD1Q96BP2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 AC073130.3-201ENST00000624389 2278 ntBASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHCHD1Q96BP2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms