Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CDC42BPAQ5VT25 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC35.04■■■■□ 3.2
CDC42BPAQ5VT25 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDC42BPAQ5VT25 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC35.04■■■■□ 3.2
CDC42BPAQ5VT25 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDC42BPAQ5VT25 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 BX842568.3-201ENST00000418104 571 ntBASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
CDC42BPAQ5VT25 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CDC42BPAQ5VT25 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
CDC42BPAQ5VT25 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
CDC42BPAQ5VT25 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
CDC42BPAQ5VT25 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC35.02■■■■□ 3.2
CDC42BPAQ5VT25 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC35.02■■■■□ 3.2
CDC42BPAQ5VT25 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
CDC42BPAQ5VT25 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
CDC42BPAQ5VT25 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CDC42BPAQ5VT25 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC35.01■■■■□ 3.2
CDC42BPAQ5VT25 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC35.01■■■■□ 3.2
CDC42BPAQ5VT25 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
CDC42BPAQ5VT25 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.19
CDC42BPAQ5VT25 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.19
CDC42BPAQ5VT25 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC35.01■■■■□ 3.19
CDC42BPAQ5VT25 AC233992.3-201ENST00000607491 485 ntBASIC35.01■■■■□ 3.19
CDC42BPAQ5VT25 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.01■■■■□ 3.19
CDC42BPAQ5VT25 VGF-203ENST00000611537 1622 ntTSL 5 BASIC35■■■■□ 3.19
CDC42BPAQ5VT25 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35■■■■□ 3.19
CDC42BPAQ5VT25 MIR3181-201ENST00000578512 73 ntBASIC35■■■■□ 3.19
CDC42BPAQ5VT25 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPAQ5VT25 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 SP2-202ENST00000613139 908 ntTSL 5 BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 MPST-208ENST00000628507 698 ntTSL 5 BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CDC42BPAQ5VT25 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC34.97■■■■□ 3.19
CDC42BPAQ5VT25 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
CDC42BPAQ5VT25 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC34.96■■■■□ 3.19
CDC42BPAQ5VT25 AC027612.3-201ENST00000413684 1047 ntBASIC34.96■■■■□ 3.19
CDC42BPAQ5VT25 PARL-206ENST00000435888 1098 ntTSL 5 BASIC34.96■■■■□ 3.19
CDC42BPAQ5VT25 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC34.96■■■■□ 3.19
CDC42BPAQ5VT25 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
CDC42BPAQ5VT25 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC34.95■■■■□ 3.19
CDC42BPAQ5VT25 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC34.95■■■■□ 3.19
CDC42BPAQ5VT25 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC34.95■■■■□ 3.19
CDC42BPAQ5VT25 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC34.95■■■■□ 3.19
CDC42BPAQ5VT25 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC34.95■■■■□ 3.19
CDC42BPAQ5VT25 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC34.95■■■■□ 3.19
CDC42BPAQ5VT25 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC34.95■■■■□ 3.18
CDC42BPAQ5VT25 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC34.95■■■■□ 3.18
CDC42BPAQ5VT25 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC34.95■■■■□ 3.18
CDC42BPAQ5VT25 KRT18P5-201ENST00000436075 1291 ntBASIC34.95■■■■□ 3.18
CDC42BPAQ5VT25 GTSE1-AS1-202ENST00000623117 1518 ntBASIC34.95■■■■□ 3.18
CDC42BPAQ5VT25 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CDC42BPAQ5VT25 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.94■■■■□ 3.18
CDC42BPAQ5VT25 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.94■■■■□ 3.18
CDC42BPAQ5VT25 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 AC034268.1-201ENST00000441047 882 ntBASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC34.93■■■■□ 3.18
CDC42BPAQ5VT25 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 IKBKGP1-201ENST00000612193 1073 ntBASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPAQ5VT25 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPAQ5VT25 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPAQ5VT25 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPAQ5VT25 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPAQ5VT25 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC34.91■■■■□ 3.18
CDC42BPAQ5VT25 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC34.91■■■■□ 3.18
CDC42BPAQ5VT25 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms