Protein–RNA interactions for Protein: Q5I0G3

MDH1B, Putative malate dehydrogenase 1B, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1BQ5I0G3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MDH1BQ5I0G3 LINC01124-201ENST00000409786 2117 ntBASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.26■■□□□ 1.47
MDH1BQ5I0G3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
MDH1BQ5I0G3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 AL512631.2-201ENST00000604634 923 ntBASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
MDH1BQ5I0G3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 MIR4466-201ENST00000606121 54 ntBASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MDH1BQ5I0G3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 ALDH1A3-203ENST00000557963 1670 ntBASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MDH1BQ5I0G3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
MDH1BQ5I0G3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 AL136116.3-201ENST00000402907 1138 ntBASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
MDH1BQ5I0G3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 LINC00543-201ENST00000567234 1845 ntBASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
MDH1BQ5I0G3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
MDH1BQ5I0G3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.18■■□□□ 1.46
MDH1BQ5I0G3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.18■■□□□ 1.46
MDH1BQ5I0G3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.18■■□□□ 1.46
MDH1BQ5I0G3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MDH1BQ5I0G3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.18■■□□□ 1.46
MDH1BQ5I0G3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MDH1BQ5I0G3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MDH1BQ5I0G3 AC141586.4-201ENST00000624558 1573 ntBASIC24.16■■□□□ 1.46
MDH1BQ5I0G3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MDH1BQ5I0G3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms