Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO2P00403 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
MT-CO2P00403 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
MT-CO2P00403 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-CO2P00403 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MT-CO2P00403 HSD17B1P1-201ENST00000590052 955 ntBASIC18.25■□□□□ 0.51
MT-CO2P00403 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-CO2P00403 MIR6765-201ENST00000614092 87 ntBASIC18.25■□□□□ 0.51
MT-CO2P00403 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO2P00403 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO2P00403 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO2P00403 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
MT-CO2P00403 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MT-CO2P00403 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO2P00403 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.24■□□□□ 0.51
MT-CO2P00403 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MT-CO2P00403 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.24■□□□□ 0.51
MT-CO2P00403 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO2P00403 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.24■□□□□ 0.51
MT-CO2P00403 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO2P00403 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO2P00403 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-CO2P00403 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-CO2P00403 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MT-CO2P00403 ABCB10P4-201ENST00000566803 2184 ntBASIC18.23■□□□□ 0.51
MT-CO2P00403 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-CO2P00403 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.23■□□□□ 0.51
MT-CO2P00403 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-CO2P00403 DUX4L9-201ENST00000449051 1259 ntBASIC18.23■□□□□ 0.51
MT-CO2P00403 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.23■□□□□ 0.51
MT-CO2P00403 AC087393.1-201ENST00000582896 145 ntBASIC18.23■□□□□ 0.51
MT-CO2P00403 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-CO2P00403 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-CO2P00403 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MT-CO2P00403 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.22■□□□□ 0.51
MT-CO2P00403 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
MT-CO2P00403 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-CO2P00403 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.21■□□□□ 0.51
MT-CO2P00403 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO2P00403 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MT-CO2P00403 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO2P00403 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-CO2P00403 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
MT-CO2P00403 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MT-CO2P00403 U85056.1-201ENST00000616429 682 ntBASIC18.21■□□□□ 0.51
MT-CO2P00403 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.21■□□□□ 0.51
MT-CO2P00403 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-CO2P00403 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
MT-CO2P00403 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-CO2P00403 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.21■□□□□ 0.5
MT-CO2P00403 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
MT-CO2P00403 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-CO2P00403 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO2P00403 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MT-CO2P00403 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-CO2P00403 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 AL592295.1-201ENST00000400984 884 ntBASIC18.2■□□□□ 0.5
MT-CO2P00403 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO2P00403 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MT-CO2P00403 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO2P00403 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MT-CO2P00403 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
MT-CO2P00403 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-CO2P00403 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MT-CO2P00403 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO2P00403 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms