Protein–RNA interactions for Protein: Q9BWM7

SFXN3, Sideroflexin-3, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3Q9BWM7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFXN3Q9BWM7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFXN3Q9BWM7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFXN3Q9BWM7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SFXN3Q9BWM7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SFXN3Q9BWM7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 MIR935-201ENST00000401179 91 ntBASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFXN3Q9BWM7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 HLA-L-211ENST00000482052 1765 ntBASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SFXN3Q9BWM7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFXN3Q9BWM7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SFXN3Q9BWM7 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 EDA-201ENST00000338901 1233 ntBASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 AC024257.2-201ENST00000549699 147 ntBASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 AC142381.2-201ENST00000566120 298 ntBASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SFXN3Q9BWM7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 AC009102.2-201ENST00000606772 1639 ntBASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
SFXN3Q9BWM7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 AP003733.4-201ENST00000623785 1697 ntBASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SFXN3Q9BWM7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SFXN3Q9BWM7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 AL355001.2-201ENST00000620617 1191 ntBASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SFXN3Q9BWM7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 AC241377.3-202ENST00000626088 1088 ntBASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 AC241585.3-202ENST00000628937 1088 ntBASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 AC245100.8-202ENST00000629247 1058 ntBASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SFXN3Q9BWM7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms