Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 AC137761.2-201ENST00000561729 223 ntBASIC12.9□□□□□ -0.34
UBR4Q5T4S7 AC145350.3-201ENST00000569033 163 ntBASIC12.9□□□□□ -0.34
UBR4Q5T4S7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UBR4Q5T4S7 POU5F1P3-201ENST00000428824 1078 ntBASIC12.9□□□□□ -0.35
UBR4Q5T4S7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
UBR4Q5T4S7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.9□□□□□ -0.35
UBR4Q5T4S7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
UBR4Q5T4S7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 AP006294.2-201ENST00000641667 209 ntBASIC12.89□□□□□ -0.35
UBR4Q5T4S7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 BID-214ENST00000617586 542 ntTSL 5 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
UBR4Q5T4S7 KRT18P21-201ENST00000515767 1272 ntBASIC12.89□□□□□ -0.35
UBR4Q5T4S7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBR4Q5T4S7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBR4Q5T4S7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.88□□□□□ -0.35
UBR4Q5T4S7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBR4Q5T4S7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.88□□□□□ -0.35
UBR4Q5T4S7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.88□□□□□ -0.35
UBR4Q5T4S7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 AL050303.2-201ENST00000619798 666 ntBASIC12.87□□□□□ -0.35
UBR4Q5T4S7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC12.87□□□□□ -0.35
UBR4Q5T4S7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.87□□□□□ -0.35
UBR4Q5T4S7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 AC006455.2-201ENST00000429931 906 ntBASIC12.86□□□□□ -0.35
UBR4Q5T4S7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBR4Q5T4S7 BX842568.3-201ENST00000418104 571 ntBASIC12.86□□□□□ -0.35
UBR4Q5T4S7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 ITM2C-210ENST00000620962 501 ntBASIC12.85□□□□□ -0.35
UBR4Q5T4S7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC12.85□□□□□ -0.35
UBR4Q5T4S7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.84□□□□□ -0.35
UBR4Q5T4S7 MIR6722-201ENST00000617286 78 ntBASIC12.83□□□□□ -0.35
UBR4Q5T4S7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBR4Q5T4S7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms