Protein–RNA interactions for Protein: Q2M238

RRN3P1, Putative RRN3-like protein RRN3P1, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1Q2M238 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RRN3P1Q2M238 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RRN3P1Q2M238 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RRN3P1Q2M238 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RRN3P1Q2M238 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.96■□□□□ 0.3
RRN3P1Q2M238 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
RRN3P1Q2M238 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RRN3P1Q2M238 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 AC011551.1-201ENST00000614101 683 ntBASIC16.94■□□□□ 0.3
RRN3P1Q2M238 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 AP003733.4-201ENST00000623785 1697 ntBASIC16.94■□□□□ 0.3
RRN3P1Q2M238 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RRN3P1Q2M238 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 AC090877.2-201ENST00000558441 1738 ntBASIC16.93■□□□□ 0.3
RRN3P1Q2M238 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 THA1P-201ENST00000590384 1145 ntBASIC16.93■□□□□ 0.3
RRN3P1Q2M238 MIR6089-201ENST00000616698 64 ntBASIC16.93■□□□□ 0.3
RRN3P1Q2M238 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRN3P1Q2M238 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
RRN3P1Q2M238 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRN3P1Q2M238 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 KRT18P24-201ENST00000344739 1156 ntBASIC16.9■□□□□ 0.3
RRN3P1Q2M238 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRN3P1Q2M238 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.3
RRN3P1Q2M238 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RRN3P1Q2M238 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRN3P1Q2M238 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RRN3P1Q2M238 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.89■□□□□ 0.29
RRN3P1Q2M238 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRN3P1Q2M238 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.89■□□□□ 0.29
RRN3P1Q2M238 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms