Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP6V0CP27449 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP6V0CP27449 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP6V0CP27449 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATP6V0CP27449 AP006261.1-201ENST00000584783 668 ntBASIC18.29■□□□□ 0.52
ATP6V0CP27449 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V0CP27449 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0CP27449 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0CP27449 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0CP27449 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATP6V0CP27449 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0CP27449 AC044849.2-201ENST00000606596 710 ntBASIC18.28■□□□□ 0.52
ATP6V0CP27449 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATP6V0CP27449 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0CP27449 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATP6V0CP27449 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0CP27449 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0CP27449 AL137060.1-201ENST00000618151 2648 ntBASIC18.27■□□□□ 0.52
ATP6V0CP27449 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0CP27449 DUX4L29-201ENST00000425409 679 ntBASIC18.27■□□□□ 0.52
ATP6V0CP27449 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6V0CP27449 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP6V0CP27449 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP6V0CP27449 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ATP6V0CP27449 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0CP27449 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0CP27449 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0CP27449 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0CP27449 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP6V0CP27449 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0CP27449 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ATP6V0CP27449 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP6V0CP27449 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP6V0CP27449 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ATP6V0CP27449 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0CP27449 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP6V0CP27449 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP6V0CP27449 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP6V0CP27449 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP6V0CP27449 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP6V0CP27449 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATP6V0CP27449 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0CP27449 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0CP27449 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0CP27449 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP6V0CP27449 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0CP27449 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP6V0CP27449 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0CP27449 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0CP27449 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0CP27449 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0CP27449 HLA-V-202ENST00000446817 847 ntBASIC18.22■□□□□ 0.51
ATP6V0CP27449 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0CP27449 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L13-201ENST00000554103 1267 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms