Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.71■■□□□ 1.55
C4BPAP04003 MIR6722-201ENST00000617286 78 ntBASIC24.71■■□□□ 1.55
C4BPAP04003 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
C4BPAP04003 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.71■■□□□ 1.55
C4BPAP04003 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.71■■□□□ 1.55
C4BPAP04003 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
C4BPAP04003 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
C4BPAP04003 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
C4BPAP04003 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
C4BPAP04003 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
C4BPAP04003 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.7■■□□□ 1.54
C4BPAP04003 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.7■■□□□ 1.54
C4BPAP04003 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.7■■□□□ 1.54
C4BPAP04003 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.7■■□□□ 1.54
C4BPAP04003 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.7■■□□□ 1.54
C4BPAP04003 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.7■■□□□ 1.54
C4BPAP04003 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
C4BPAP04003 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.7■■□□□ 1.54
C4BPAP04003 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
C4BPAP04003 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
C4BPAP04003 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
C4BPAP04003 ALDH1A3-203ENST00000557963 1670 ntBASIC24.69■■□□□ 1.54
C4BPAP04003 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
C4BPAP04003 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
C4BPAP04003 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.69■■□□□ 1.54
C4BPAP04003 UNC93B8-201ENST00000511903 705 ntBASIC24.69■■□□□ 1.54
C4BPAP04003 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
C4BPAP04003 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.69■■□□□ 1.54
C4BPAP04003 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.69■■□□□ 1.54
C4BPAP04003 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
C4BPAP04003 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
C4BPAP04003 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
C4BPAP04003 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.68■■□□□ 1.54
C4BPAP04003 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
C4BPAP04003 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.68■■□□□ 1.54
C4BPAP04003 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
C4BPAP04003 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
C4BPAP04003 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.67■■□□□ 1.54
C4BPAP04003 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
C4BPAP04003 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
C4BPAP04003 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.66■■□□□ 1.54
C4BPAP04003 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 TSPY9P-201ENST00000440215 945 ntBASIC24.66■■□□□ 1.54
C4BPAP04003 TSPY11P-201ENST00000442607 1045 ntBASIC24.66■■□□□ 1.54
C4BPAP04003 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.66■■□□□ 1.54
C4BPAP04003 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C4BPAP04003 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
C4BPAP04003 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
C4BPAP04003 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
C4BPAP04003 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.65■■□□□ 1.54
C4BPAP04003 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.65■■□□□ 1.54
C4BPAP04003 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.65■■□□□ 1.54
C4BPAP04003 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
C4BPAP04003 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
C4BPAP04003 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
C4BPAP04003 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
C4BPAP04003 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
C4BPAP04003 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
C4BPAP04003 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
C4BPAP04003 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
C4BPAP04003 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.64■■□□□ 1.54
C4BPAP04003 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.64■■□□□ 1.54
C4BPAP04003 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.64■■□□□ 1.54
C4BPAP04003 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
C4BPAP04003 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
C4BPAP04003 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
C4BPAP04003 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.63■■□□□ 1.53
C4BPAP04003 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.63■■□□□ 1.53
C4BPAP04003 AC010997.5-201ENST00000609182 354 ntBASIC24.63■■□□□ 1.53
C4BPAP04003 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.63■■□□□ 1.53
C4BPAP04003 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.63■■□□□ 1.53
C4BPAP04003 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
C4BPAP04003 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
C4BPAP04003 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
C4BPAP04003 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
C4BPAP04003 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
C4BPAP04003 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.62■■□□□ 1.53
C4BPAP04003 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
C4BPAP04003 MTDHP2-201ENST00000601468 714 ntBASIC24.62■■□□□ 1.53
C4BPAP04003 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
C4BPAP04003 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms