Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.35■■□□□ 1.33
TBC1D3BA6NDS4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D3BA6NDS4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.35■■□□□ 1.33
TBC1D3BA6NDS4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D3BA6NDS4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TBC1D3BA6NDS4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TBC1D3BA6NDS4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.34■■□□□ 1.33
TBC1D3BA6NDS4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
TBC1D3BA6NDS4 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.34■■□□□ 1.33
TBC1D3BA6NDS4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TBC1D3BA6NDS4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D3BA6NDS4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D3BA6NDS4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D3BA6NDS4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.33■■□□□ 1.33
TBC1D3BA6NDS4 AC009102.2-201ENST00000606772 1639 ntBASIC23.33■■□□□ 1.32
TBC1D3BA6NDS4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 AC099791.2-201ENST00000605725 427 ntBASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D3BA6NDS4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TBC1D3BA6NDS4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D3BA6NDS4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D3BA6NDS4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D3BA6NDS4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TBC1D3BA6NDS4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 HLA-L-211ENST00000482052 1765 ntBASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D3BA6NDS4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 AF213884.3-201ENST00000563833 479 ntBASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 AL136967.2-201ENST00000623968 743 ntBASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D3BA6NDS4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 SERBP1P1-201ENST00000396021 1160 ntBASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D3BA6NDS4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 MIR4767-201ENST00000582827 78 ntBASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TBC1D3BA6NDS4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms