Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.62■■□□□ 1.53
LINC01553A4QN01 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LINC01553A4QN01 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.62■■□□□ 1.53
LINC01553A4QN01 MIR3181-201ENST00000578512 73 ntBASIC24.62■■□□□ 1.53
LINC01553A4QN01 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.62■■□□□ 1.53
LINC01553A4QN01 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.62■■□□□ 1.53
LINC01553A4QN01 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LINC01553A4QN01 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LINC01553A4QN01 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LINC01553A4QN01 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LINC01553A4QN01 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
LINC01553A4QN01 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.61■■□□□ 1.53
LINC01553A4QN01 AC092437.1-201ENST00000624794 1048 ntBASIC24.61■■□□□ 1.53
LINC01553A4QN01 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LINC01553A4QN01 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.61■■□□□ 1.53
LINC01553A4QN01 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.61■■□□□ 1.53
LINC01553A4QN01 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
LINC01553A4QN01 AC010501.1-201ENST00000606270 1962 ntBASIC24.6■■□□□ 1.53
LINC01553A4QN01 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.6■■□□□ 1.53
LINC01553A4QN01 YBX1P1-201ENST00000445822 960 ntBASIC24.6■■□□□ 1.53
LINC01553A4QN01 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.6■■□□□ 1.53
LINC01553A4QN01 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.6■■□□□ 1.53
LINC01553A4QN01 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LINC01553A4QN01 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
LINC01553A4QN01 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
LINC01553A4QN01 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
LINC01553A4QN01 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LINC01553A4QN01 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
LINC01553A4QN01 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
LINC01553A4QN01 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.59■■□□□ 1.53
LINC01553A4QN01 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LINC01553A4QN01 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LINC01553A4QN01 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LINC01553A4QN01 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LINC01553A4QN01 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LINC01553A4QN01 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LINC01553A4QN01 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.59■■□□□ 1.53
LINC01553A4QN01 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.58■■□□□ 1.53
LINC01553A4QN01 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
LINC01553A4QN01 AC009086.3-201ENST00000623486 1008 ntBASIC24.58■■□□□ 1.53
LINC01553A4QN01 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LINC01553A4QN01 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LINC01553A4QN01 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LINC01553A4QN01 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
LINC01553A4QN01 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.57■■□□□ 1.52
LINC01553A4QN01 SLC47A1P1-202ENST00000449666 945 ntBASIC24.57■■□□□ 1.52
LINC01553A4QN01 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.57■■□□□ 1.52
LINC01553A4QN01 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.57■■□□□ 1.52
LINC01553A4QN01 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LINC01553A4QN01 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
LINC01553A4QN01 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L2-201ENST00000561772 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L6-201ENST00000626483 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L1-201ENST00000627662 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L8-201ENST00000629013 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L3-201ENST00000630187 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L7-201ENST00000630678 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 DUX4L5-201ENST00000630834 1275 ntBASIC24.56■■□□□ 1.52
LINC01553A4QN01 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LINC01553A4QN01 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LINC01553A4QN01 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.56■■□□□ 1.52
LINC01553A4QN01 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
LINC01553A4QN01 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LINC01553A4QN01 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LINC01553A4QN01 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LINC01553A4QN01 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LINC01553A4QN01 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.55■■□□□ 1.52
LINC01553A4QN01 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.55■■□□□ 1.52
LINC01553A4QN01 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LINC01553A4QN01 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
LINC01553A4QN01 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.54■■□□□ 1.52
LINC01553A4QN01 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LINC01553A4QN01 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.54■■□□□ 1.52
LINC01553A4QN01 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LINC01553A4QN01 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
LINC01553A4QN01 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
LINC01553A4QN01 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.54■■□□□ 1.52
LINC01553A4QN01 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.54■■□□□ 1.52
LINC01553A4QN01 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.53■■□□□ 1.52
LINC01553A4QN01 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LINC01553A4QN01 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LINC01553A4QN01 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LINC01553A4QN01 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.53■■□□□ 1.52
LINC01553A4QN01 AC126544.1-201ENST00000580842 1059 ntBASIC24.53■■□□□ 1.52
LINC01553A4QN01 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.53■■□□□ 1.52
LINC01553A4QN01 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.53■■□□□ 1.52
LINC01553A4QN01 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LINC01553A4QN01 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LINC01553A4QN01 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.52■■□□□ 1.52
LINC01553A4QN01 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.51■■□□□ 1.51
LINC01553A4QN01 AL022069.1-201ENST00000568025 1636 ntBASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms