Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 UNC93B8-201ENST00000511903 705 ntBASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV4S1A1TA0A5B7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.33■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.33■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV4S1A1TA0A5B7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 FOXO3B-201ENST00000395675 1928 ntBASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV4S1A1TA0A5B7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AC092028.1-203ENST00000608262 953 ntBASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TCRBV4S1A1TA0A5B7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV4S1A1TA0A5B7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TCRBV4S1A1TA0A5B7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV4S1A1TA0A5B7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV4S1A1TA0A5B7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.31■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AC004812.2-201ENST00000611079 2094 ntBASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AC008406.3-201ENST00000620001 1374 ntBASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRBV4S1A1TA0A5B7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AC012676.1-201ENST00000574705 1949 ntBASIC18.29■□□□□ 0.52
TCRBV4S1A1TA0A5B7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV4S1A1TA0A5B7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV4S1A1TA0A5B7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 MTDHP2-201ENST00000601468 714 ntBASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC133561.1-201ENST00000568600 2415 ntBASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms