Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH15Q96QU1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PCDH15Q96QU1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.7■■□□□ 1.23
PCDH15Q96QU1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH15Q96QU1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH15Q96QU1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDH15Q96QU1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDH15Q96QU1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PCDH15Q96QU1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH15Q96QU1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH15Q96QU1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH15Q96QU1 AC092803.2-201ENST00000564287 1899 ntBASIC22.69■■□□□ 1.22
PCDH15Q96QU1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH15Q96QU1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH15Q96QU1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH15Q96QU1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH15Q96QU1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH15Q96QU1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
PCDH15Q96QU1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH15Q96QU1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH15Q96QU1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH15Q96QU1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH15Q96QU1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH15Q96QU1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDH15Q96QU1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 AC099791.1-201ENST00000416440 715 ntBASIC22.65■■□□□ 1.22
PCDH15Q96QU1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 AC099791.2-201ENST00000605725 427 ntBASIC22.65■■□□□ 1.22
PCDH15Q96QU1 AL138724.1-201ENST00000606771 1088 ntBASIC22.65■■□□□ 1.22
PCDH15Q96QU1 AC092171.4-201ENST00000609130 632 ntBASIC22.65■■□□□ 1.22
PCDH15Q96QU1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH15Q96QU1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH15Q96QU1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDH15Q96QU1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH15Q96QU1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 IRS3P-201ENST00000223076 1006 ntBASIC22.63■■□□□ 1.21
PCDH15Q96QU1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH15Q96QU1 C17orf82-201ENST00000623772 1530 ntBASIC22.63■■□□□ 1.21
PCDH15Q96QU1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH15Q96QU1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 AC008764.7-201ENST00000593779 1081 ntBASIC22.61■■□□□ 1.21
PCDH15Q96QU1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PCDH15Q96QU1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH15Q96QU1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH15Q96QU1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH15Q96QU1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH15Q96QU1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 AC090192.1-201ENST00000517740 490 ntBASIC22.59■■□□□ 1.21
PCDH15Q96QU1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms