Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 AC123595.1-201ENST00000440769 1046 ntBASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 CDCA4P2-201ENST00000441182 718 ntBASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD1Q96PZ7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.78■□□□□ 0.76
CSMD1Q96PZ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 AC027612.3-201ENST00000413684 1047 ntBASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSMD1Q96PZ7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSMD1Q96PZ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CSMD1Q96PZ7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CSMD1Q96PZ7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 TERF1P2-201ENST00000583350 1212 ntBASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 AC136469.2-201ENST00000623944 1028 ntBASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CSMD1Q96PZ7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 AC004448.1-201ENST00000458332 883 ntBASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 FOXO3B-201ENST00000395675 1928 ntBASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD1Q96PZ7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 AL138724.1-201ENST00000606771 1088 ntBASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD1Q96PZ7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 TSPY26P-201ENST00000476365 1326 ntBASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD1Q96PZ7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms