Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SLC6A10P-202ENST00000431994 2058 ntBASIC18.07■□□□□ 0.48
LINC01006Q8NI28 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 MIR939-201ENST00000401314 82 ntBASIC18.07■□□□□ 0.48
LINC01006Q8NI28 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 AL121749.1-202ENST00000609313 2153 ntBASIC18.07■□□□□ 0.48
LINC01006Q8NI28 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01006Q8NI28 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01006Q8NI28 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01006Q8NI28 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01006Q8NI28 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01006Q8NI28 AP001330.3-201ENST00000520123 633 ntBASIC18.06■□□□□ 0.48
LINC01006Q8NI28 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01006Q8NI28 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01006Q8NI28 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 AC092666.2-201ENST00000613287 246 ntBASIC18.05■□□□□ 0.48
LINC01006Q8NI28 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01006Q8NI28 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 AC091305.1-201ENST00000479476 895 ntBASIC18.04■□□□□ 0.48
LINC01006Q8NI28 MIR4767-201ENST00000582827 78 ntBASIC18.04■□□□□ 0.48
LINC01006Q8NI28 AC099791.2-201ENST00000605725 427 ntBASIC18.04■□□□□ 0.48
LINC01006Q8NI28 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC01006Q8NI28 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 MIR5787-201ENST00000611784 55 ntBASIC18.03■□□□□ 0.48
LINC01006Q8NI28 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC01006Q8NI28 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 AL022069.1-201ENST00000568025 1636 ntBASIC18.02■□□□□ 0.48
LINC01006Q8NI28 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 SERBP1P1-201ENST00000396021 1160 ntBASIC18.02■□□□□ 0.48
LINC01006Q8NI28 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 MIR6089-201ENST00000616698 64 ntBASIC18.02■□□□□ 0.48
LINC01006Q8NI28 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01006Q8NI28 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LINC01006Q8NI28 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
LINC01006Q8NI28 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 AC009102.2-201ENST00000606772 1639 ntBASIC18.01■□□□□ 0.47
LINC01006Q8NI28 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01006Q8NI28 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18■□□□□ 0.47
LINC01006Q8NI28 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01006Q8NI28 PTCHD3P2-201ENST00000424937 1205 ntBASIC18■□□□□ 0.47
LINC01006Q8NI28 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01006Q8NI28 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 AL138724.1-201ENST00000606771 1088 ntBASIC17.99■□□□□ 0.47
LINC01006Q8NI28 AC011298.3-201ENST00000615796 283 ntBASIC17.99■□□□□ 0.47
LINC01006Q8NI28 RASA4CP-201ENST00000424092 1398 ntBASIC17.99■□□□□ 0.47
LINC01006Q8NI28 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01006Q8NI28 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01006Q8NI28 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01006Q8NI28 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01006Q8NI28 CA15P2-201ENST00000611168 834 ntBASIC17.98■□□□□ 0.47
LINC01006Q8NI28 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01006Q8NI28 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01006Q8NI28 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LINC01006Q8NI28 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01006Q8NI28 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms