Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RETREG2Q8NC44 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RETREG2Q8NC44 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RETREG2Q8NC44 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RETREG2Q8NC44 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
RETREG2Q8NC44 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RETREG2Q8NC44 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RETREG2Q8NC44 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RETREG2Q8NC44 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.04■■□□□ 1.76
RETREG2Q8NC44 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.04■■□□□ 1.76
RETREG2Q8NC44 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.03■■□□□ 1.76
RETREG2Q8NC44 AC133561.4-201ENST00000566112 224 ntBASIC26.03■■□□□ 1.76
RETREG2Q8NC44 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.03■■□□□ 1.76
RETREG2Q8NC44 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RETREG2Q8NC44 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RETREG2Q8NC44 AC090877.2-201ENST00000558441 1738 ntBASIC26.02■■□□□ 1.76
RETREG2Q8NC44 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RETREG2Q8NC44 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RETREG2Q8NC44 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26■■□□□ 1.75
RETREG2Q8NC44 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26■■□□□ 1.75
RETREG2Q8NC44 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RETREG2Q8NC44 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26■■□□□ 1.75
RETREG2Q8NC44 AL512631.2-201ENST00000604634 923 ntBASIC26■■□□□ 1.75
RETREG2Q8NC44 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RETREG2Q8NC44 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RETREG2Q8NC44 AP003733.4-201ENST00000623785 1697 ntBASIC25.99■■□□□ 1.75
RETREG2Q8NC44 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 AF131216.4-201ENST00000638924 1588 ntBASIC25.98■■□□□ 1.75
RETREG2Q8NC44 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
RETREG2Q8NC44 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RETREG2Q8NC44 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RETREG2Q8NC44 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RETREG2Q8NC44 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RETREG2Q8NC44 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RETREG2Q8NC44 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RETREG2Q8NC44 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.96■■□□□ 1.75
RETREG2Q8NC44 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RETREG2Q8NC44 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RETREG2Q8NC44 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
RETREG2Q8NC44 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.95■■□□□ 1.74
RETREG2Q8NC44 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RETREG2Q8NC44 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RETREG2Q8NC44 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RETREG2Q8NC44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RETREG2Q8NC44 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RETREG2Q8NC44 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
RETREG2Q8NC44 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RETREG2Q8NC44 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RETREG2Q8NC44 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RETREG2Q8NC44 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
RETREG2Q8NC44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
RETREG2Q8NC44 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RETREG2Q8NC44 PBX2P1-201ENST00000493219 1291 ntBASIC25.92■■□□□ 1.74
RETREG2Q8NC44 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.92■■□□□ 1.74
RETREG2Q8NC44 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.92■■□□□ 1.74
RETREG2Q8NC44 SLC6A10P-202ENST00000431994 2058 ntBASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms