Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRTM1Q86UE6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRTM1Q86UE6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM1Q86UE6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRTM1Q86UE6 AC007029.1-201ENST00000604183 313 ntBASIC19.95■□□□□ 0.78
LRRTM1Q86UE6 AC233723.2-201ENST00000623798 2106 ntBASIC19.95■□□□□ 0.78
LRRTM1Q86UE6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM1Q86UE6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 DUSP8P3-201ENST00000399571 1760 ntBASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 AC026202.3-201ENST00000600805 1127 ntBASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRTM1Q86UE6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 AC092068.2-201ENST00000590491 1708 ntBASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRRTM1Q86UE6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 AC022413.1-201ENST00000624602 984 ntBASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM1Q86UE6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 EP400NL-214ENST00000641289 2402 ntBASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM1Q86UE6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRTM1Q86UE6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRTM1Q86UE6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LRRTM1Q86UE6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM1Q86UE6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM1Q86UE6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRRTM1Q86UE6 C1orf229-201ENST00000623686 2258 ntBASIC19.87■□□□□ 0.77
LRRTM1Q86UE6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM1Q86UE6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms