Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
USP31Q70CQ4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.27■■■□□ 2.6
USP31Q70CQ4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP31Q70CQ4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
USP31Q70CQ4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
USP31Q70CQ4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
USP31Q70CQ4 MIR939-201ENST00000401314 82 ntBASIC31.26■■■□□ 2.59
USP31Q70CQ4 AC026271.2-201ENST00000428091 497 ntBASIC31.26■■■□□ 2.59
USP31Q70CQ4 AP001330.3-201ENST00000520123 633 ntBASIC31.26■■■□□ 2.59
USP31Q70CQ4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
USP31Q70CQ4 AL136967.2-201ENST00000623968 743 ntBASIC31.26■■■□□ 2.59
USP31Q70CQ4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP31Q70CQ4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.25■■■□□ 2.59
USP31Q70CQ4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.25■■■□□ 2.59
USP31Q70CQ4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.25■■■□□ 2.59
USP31Q70CQ4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.25■■■□□ 2.59
USP31Q70CQ4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
USP31Q70CQ4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.24■■■□□ 2.59
USP31Q70CQ4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.24■■■□□ 2.59
USP31Q70CQ4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
USP31Q70CQ4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
USP31Q70CQ4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP31Q70CQ4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP31Q70CQ4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.23■■■□□ 2.59
USP31Q70CQ4 AF213884.3-201ENST00000563833 479 ntBASIC31.23■■■□□ 2.59
USP31Q70CQ4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
USP31Q70CQ4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
USP31Q70CQ4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.23■■■□□ 2.59
USP31Q70CQ4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP31Q70CQ4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.23■■■□□ 2.59
USP31Q70CQ4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP31Q70CQ4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
USP31Q70CQ4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.22■■■□□ 2.59
USP31Q70CQ4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP31Q70CQ4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.22■■■□□ 2.59
USP31Q70CQ4 AC145676.1-201ENST00000514988 2004 ntBASIC31.22■■■□□ 2.59
USP31Q70CQ4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP31Q70CQ4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.21■■■□□ 2.59
USP31Q70CQ4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.21■■■□□ 2.59
USP31Q70CQ4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
USP31Q70CQ4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
USP31Q70CQ4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP31Q70CQ4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.2■■■□□ 2.59
USP31Q70CQ4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
USP31Q70CQ4 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.2■■■□□ 2.59
USP31Q70CQ4 AC009102.2-201ENST00000606772 1639 ntBASIC31.19■■■□□ 2.58
USP31Q70CQ4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
USP31Q70CQ4 SERBP1P1-201ENST00000396021 1160 ntBASIC31.18■■■□□ 2.58
USP31Q70CQ4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
USP31Q70CQ4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP31Q70CQ4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
USP31Q70CQ4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.18■■■□□ 2.58
USP31Q70CQ4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.18■■■□□ 2.58
USP31Q70CQ4 AL022069.1-201ENST00000568025 1636 ntBASIC31.18■■■□□ 2.58
USP31Q70CQ4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP31Q70CQ4 AC105265.2-201ENST00000467189 838 ntBASIC31.17■■■□□ 2.58
USP31Q70CQ4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.17■■■□□ 2.58
USP31Q70CQ4 AC092171.4-201ENST00000609130 632 ntBASIC31.17■■■□□ 2.58
USP31Q70CQ4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP31Q70CQ4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP31Q70CQ4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
USP31Q70CQ4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP31Q70CQ4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.17■■■□□ 2.58
USP31Q70CQ4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.17■■■□□ 2.58
USP31Q70CQ4 MIR4767-201ENST00000582827 78 ntBASIC31.17■■■□□ 2.58
USP31Q70CQ4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.17■■■□□ 2.58
USP31Q70CQ4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP31Q70CQ4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP31Q70CQ4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP31Q70CQ4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.16■■■□□ 2.58
USP31Q70CQ4 SYT6-210ENST00000641643 1587 ntBASIC31.16■■■□□ 2.58
USP31Q70CQ4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
USP31Q70CQ4 C17orf82-201ENST00000623772 1530 ntBASIC31.16■■■□□ 2.58
USP31Q70CQ4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.16■■■□□ 2.58
USP31Q70CQ4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
USP31Q70CQ4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
USP31Q70CQ4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
USP31Q70CQ4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
USP31Q70CQ4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
USP31Q70CQ4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.14■■■□□ 2.58
USP31Q70CQ4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.14■■■□□ 2.58
USP31Q70CQ4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.14■■■□□ 2.58
USP31Q70CQ4 AL138724.1-201ENST00000606771 1088 ntBASIC31.14■■■□□ 2.58
USP31Q70CQ4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
USP31Q70CQ4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.14■■■□□ 2.58
USP31Q70CQ4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
USP31Q70CQ4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP31Q70CQ4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP31Q70CQ4 AC091305.1-201ENST00000479476 895 ntBASIC31.13■■■□□ 2.57
USP31Q70CQ4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
USP31Q70CQ4 AC099791.2-201ENST00000605725 427 ntBASIC31.13■■■□□ 2.57
USP31Q70CQ4 AC011298.3-201ENST00000615796 283 ntBASIC31.13■■■□□ 2.57
USP31Q70CQ4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
USP31Q70CQ4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms