Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC006455.2-201ENST00000429931 906 ntBASIC20.35■□□□□ 0.85
LRRK2Q5S007 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK2Q5S007 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK2Q5S007 AC080038.1-201ENST00000611274 1154 ntBASIC20.35■□□□□ 0.85
LRRK2Q5S007 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRK2Q5S007 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK2Q5S007 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK2Q5S007 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK2Q5S007 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK2Q5S007 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.34■□□□□ 0.85
LRRK2Q5S007 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.34■□□□□ 0.85
LRRK2Q5S007 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK2Q5S007 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK2Q5S007 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRK2Q5S007 CDCA4P2-201ENST00000441182 718 ntBASIC20.34■□□□□ 0.85
LRRK2Q5S007 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK2Q5S007 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK2Q5S007 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.33■□□□□ 0.85
LRRK2Q5S007 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.33■□□□□ 0.85
LRRK2Q5S007 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.33■□□□□ 0.85
LRRK2Q5S007 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LRRK2Q5S007 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK2Q5S007 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRRK2Q5S007 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRK2Q5S007 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
LRRK2Q5S007 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LRRK2Q5S007 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK2Q5S007 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.32■□□□□ 0.84
LRRK2Q5S007 MIR3181-201ENST00000578512 73 ntBASIC20.32■□□□□ 0.84
LRRK2Q5S007 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK2Q5S007 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRK2Q5S007 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRK2Q5S007 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK2Q5S007 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
LRRK2Q5S007 ABCB10P1-201ENST00000614297 2181 ntBASIC20.31■□□□□ 0.84
LRRK2Q5S007 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK2Q5S007 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRK2Q5S007 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRRK2Q5S007 AC006015.1-201ENST00000429970 570 ntBASIC20.31■□□□□ 0.84
LRRK2Q5S007 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK2Q5S007 TSPY26P-201ENST00000476365 1326 ntBASIC20.31■□□□□ 0.84
LRRK2Q5S007 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRK2Q5S007 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRK2Q5S007 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 TSPY20P-201ENST00000450910 630 ntBASIC20.3■□□□□ 0.84
LRRK2Q5S007 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 KRT18P14-201ENST00000534205 1250 ntBASIC20.3■□□□□ 0.84
LRRK2Q5S007 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 AC142086.2-201ENST00000569753 217 ntBASIC20.3■□□□□ 0.84
LRRK2Q5S007 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK2Q5S007 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK2Q5S007 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 AC026185.1-201ENST00000445748 174 ntBASIC20.3■□□□□ 0.84
LRRK2Q5S007 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LRRK2Q5S007 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK2Q5S007 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRK2Q5S007 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRK2Q5S007 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRK2Q5S007 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRK2Q5S007 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRRK2Q5S007 AC241377.3-202ENST00000626088 1088 ntBASIC20.28■□□□□ 0.84
LRRK2Q5S007 AC241585.3-202ENST00000628937 1088 ntBASIC20.28■□□□□ 0.84
LRRK2Q5S007 AC245100.8-202ENST00000629247 1058 ntBASIC20.28■□□□□ 0.84
LRRK2Q5S007 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.28■□□□□ 0.84
LRRK2Q5S007 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRRK2Q5S007 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRK2Q5S007 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRK2Q5S007 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRK2Q5S007 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRK2Q5S007 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRK2Q5S007 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 CROCCP5-201ENST00000436658 830 ntBASIC20.27■□□□□ 0.84
LRRK2Q5S007 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRK2Q5S007 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LRRK2Q5S007 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRK2Q5S007 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRRK2Q5S007 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRK2Q5S007 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRK2Q5S007 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRK2Q5S007 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRK2Q5S007 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRK2Q5S007 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRRK2Q5S007 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRK2Q5S007 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms