Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.35■□□□□ 0.85
FREM1Q5H8C1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FREM1Q5H8C1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FREM1Q5H8C1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.33■□□□□ 0.85
FREM1Q5H8C1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.33■□□□□ 0.84
FREM1Q5H8C1 HLA-L-211ENST00000482052 1765 ntBASIC20.33■□□□□ 0.84
FREM1Q5H8C1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.32■□□□□ 0.84
FREM1Q5H8C1 MIR4466-201ENST00000606121 54 ntBASIC20.32■□□□□ 0.84
FREM1Q5H8C1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM1Q5H8C1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.32■□□□□ 0.84
FREM1Q5H8C1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM1Q5H8C1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FREM1Q5H8C1 AL512631.2-201ENST00000604634 923 ntBASIC20.32■□□□□ 0.84
FREM1Q5H8C1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.32■□□□□ 0.84
FREM1Q5H8C1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FREM1Q5H8C1 AL117332.1-201ENST00000622628 974 ntBASIC20.31■□□□□ 0.84
FREM1Q5H8C1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
FREM1Q5H8C1 AC142381.3-201ENST00000568208 1670 ntBASIC20.29■□□□□ 0.84
FREM1Q5H8C1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FREM1Q5H8C1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 AC004448.1-201ENST00000458332 883 ntBASIC20.28■□□□□ 0.84
FREM1Q5H8C1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FREM1Q5H8C1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FREM1Q5H8C1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FREM1Q5H8C1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FREM1Q5H8C1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.27■□□□□ 0.83
FREM1Q5H8C1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FREM1Q5H8C1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms