Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PMS1P54277 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.39■■□□□ 1.65
PMS1P54277 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PMS1P54277 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.38■■□□□ 1.65
PMS1P54277 AC133561.1-201ENST00000568600 2415 ntBASIC25.38■■□□□ 1.65
PMS1P54277 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.38■■□□□ 1.65
PMS1P54277 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PMS1P54277 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PMS1P54277 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PMS1P54277 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.37■■□□□ 1.65
PMS1P54277 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PMS1P54277 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PMS1P54277 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.37■■□□□ 1.65
PMS1P54277 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
PMS1P54277 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.36■■□□□ 1.65
PMS1P54277 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 TSPY13P-201ENST00000338964 914 ntBASIC25.36■■□□□ 1.65
PMS1P54277 AC010980.1-201ENST00000587192 1142 ntBASIC25.36■■□□□ 1.65
PMS1P54277 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.36■■□□□ 1.65
PMS1P54277 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.35■■□□□ 1.65
PMS1P54277 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.35■■□□□ 1.65
PMS1P54277 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.35■■□□□ 1.65
PMS1P54277 AC011551.1-201ENST00000614101 683 ntBASIC25.35■■□□□ 1.65
PMS1P54277 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.34■■□□□ 1.65
PMS1P54277 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.34■■□□□ 1.65
PMS1P54277 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 BHLHE23-202ENST00000612929 1109 ntBASIC25.34■■□□□ 1.65
PMS1P54277 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PMS1P54277 DUSP8P5-201ENST00000422884 1815 ntBASIC25.33■■□□□ 1.65
PMS1P54277 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PMS1P54277 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.33■■□□□ 1.65
PMS1P54277 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PMS1P54277 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PMS1P54277 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PMS1P54277 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PMS1P54277 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PMS1P54277 AC131274.2-201ENST00000580697 1507 ntBASIC25.32■■□□□ 1.64
PMS1P54277 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.32■■□□□ 1.64
PMS1P54277 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.32■■□□□ 1.64
PMS1P54277 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.32■■□□□ 1.64
PMS1P54277 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PMS1P54277 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.32■■□□□ 1.64
PMS1P54277 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PMS1P54277 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.32■■□□□ 1.64
PMS1P54277 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PMS1P54277 C9orf163-202ENST00000624034 2573 ntBASIC25.31■■□□□ 1.64
PMS1P54277 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 AC022616.5-201ENST00000518796 181 ntBASIC25.31■■□□□ 1.64
PMS1P54277 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.31■■□□□ 1.64
PMS1P54277 AC120024.1-201ENST00000562672 995 ntBASIC25.31■■□□□ 1.64
PMS1P54277 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.31■■□□□ 1.64
PMS1P54277 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PMS1P54277 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PMS1P54277 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
PMS1P54277 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.3■■□□□ 1.64
PMS1P54277 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PMS1P54277 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.29■■□□□ 1.64
PMS1P54277 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.29■■□□□ 1.64
PMS1P54277 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.28■■□□□ 1.64
PMS1P54277 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.28■■□□□ 1.64
PMS1P54277 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.28■■□□□ 1.64
PMS1P54277 AL033527.3-201ENST00000566366 1196 ntBASIC25.28■■□□□ 1.64
PMS1P54277 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.28■■□□□ 1.64
PMS1P54277 AC068473.5-201ENST00000616428 2072 ntBASIC25.28■■□□□ 1.64
PMS1P54277 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.27■■□□□ 1.64
PMS1P54277 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PMS1P54277 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms