Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PMS1P54277 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.39■■□□□ 1.65
PMS1P54277 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PMS1P54277 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.38■■□□□ 1.65
PMS1P54277 AC133561.1-201ENST00000568600 2415 ntBASIC25.38■■□□□ 1.65
PMS1P54277 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.38■■□□□ 1.65
PMS1P54277 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PMS1P54277 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PMS1P54277 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PMS1P54277 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.37■■□□□ 1.65
PMS1P54277 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PMS1P54277 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PMS1P54277 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.37■■□□□ 1.65
PMS1P54277 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
PMS1P54277 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.36■■□□□ 1.65
PMS1P54277 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 TSPY13P-201ENST00000338964 914 ntBASIC25.36■■□□□ 1.65
PMS1P54277 AC010980.1-201ENST00000587192 1142 ntBASIC25.36■■□□□ 1.65
PMS1P54277 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.36■■□□□ 1.65
PMS1P54277 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PMS1P54277 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.35■■□□□ 1.65
PMS1P54277 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.35■■□□□ 1.65
PMS1P54277 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.35■■□□□ 1.65
PMS1P54277 AC011551.1-201ENST00000614101 683 ntBASIC25.35■■□□□ 1.65
PMS1P54277 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PMS1P54277 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.34■■□□□ 1.65
PMS1P54277 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.34■■□□□ 1.65
PMS1P54277 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 BHLHE23-202ENST00000612929 1109 ntBASIC25.34■■□□□ 1.65
PMS1P54277 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PMS1P54277 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PMS1P54277 DUSP8P5-201ENST00000422884 1815 ntBASIC25.33■■□□□ 1.65
PMS1P54277 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PMS1P54277 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.33■■□□□ 1.65
PMS1P54277 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PMS1P54277 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PMS1P54277 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PMS1P54277 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PMS1P54277 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PMS1P54277 AC131274.2-201ENST00000580697 1507 ntBASIC25.32■■□□□ 1.64
PMS1P54277 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.32■■□□□ 1.64
PMS1P54277 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.32■■□□□ 1.64
PMS1P54277 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.32■■□□□ 1.64
PMS1P54277 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PMS1P54277 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.32■■□□□ 1.64
PMS1P54277 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PMS1P54277 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.32■■□□□ 1.64
PMS1P54277 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PMS1P54277 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PMS1P54277 C9orf163-202ENST00000624034 2573 ntBASIC25.31■■□□□ 1.64
PMS1P54277 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 AC022616.5-201ENST00000518796 181 ntBASIC25.31■■□□□ 1.64
PMS1P54277 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.31■■□□□ 1.64
PMS1P54277 AC120024.1-201ENST00000562672 995 ntBASIC25.31■■□□□ 1.64
PMS1P54277 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.31■■□□□ 1.64
PMS1P54277 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.31■■□□□ 1.64
PMS1P54277 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PMS1P54277 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PMS1P54277 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
PMS1P54277 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.3■■□□□ 1.64
PMS1P54277 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PMS1P54277 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PMS1P54277 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.29■■□□□ 1.64
PMS1P54277 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.29■■□□□ 1.64
PMS1P54277 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PMS1P54277 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.28■■□□□ 1.64
PMS1P54277 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.28■■□□□ 1.64
PMS1P54277 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.28■■□□□ 1.64
PMS1P54277 AL033527.3-201ENST00000566366 1196 ntBASIC25.28■■□□□ 1.64
PMS1P54277 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.28■■□□□ 1.64
PMS1P54277 AC068473.5-201ENST00000616428 2072 ntBASIC25.28■■□□□ 1.64
PMS1P54277 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PMS1P54277 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.27■■□□□ 1.64
PMS1P54277 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PMS1P54277 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms