Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
COL15A1P39059 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.49■■■□□ 2.31
COL15A1P39059 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL15A1P39059 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL15A1P39059 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.49■■■□□ 2.31
COL15A1P39059 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
COL15A1P39059 DUX4L19-201ENST00000557448 1267 ntBASIC29.49■■■□□ 2.31
COL15A1P39059 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.49■■■□□ 2.31
COL15A1P39059 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
COL15A1P39059 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL15A1P39059 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL15A1P39059 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
COL15A1P39059 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL15A1P39059 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.47■■■□□ 2.31
COL15A1P39059 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
COL15A1P39059 AC104564.3-201ENST00000582367 638 ntBASIC29.47■■■□□ 2.31
COL15A1P39059 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL15A1P39059 AC131274.2-201ENST00000580697 1507 ntBASIC29.46■■■□□ 2.31
COL15A1P39059 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL15A1P39059 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL15A1P39059 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
COL15A1P39059 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
COL15A1P39059 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
COL15A1P39059 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
COL15A1P39059 MIR4767-201ENST00000582827 78 ntBASIC29.45■■■□□ 2.31
COL15A1P39059 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
COL15A1P39059 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
COL15A1P39059 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
COL15A1P39059 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL15A1P39059 AC091305.1-201ENST00000479476 895 ntBASIC29.44■■■□□ 2.3
COL15A1P39059 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.44■■■□□ 2.3
COL15A1P39059 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.44■■■□□ 2.3
COL15A1P39059 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL15A1P39059 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL15A1P39059 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL15A1P39059 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL15A1P39059 SYT6-210ENST00000641643 1587 ntBASIC29.43■■■□□ 2.3
COL15A1P39059 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
COL15A1P39059 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.42■■■□□ 2.3
COL15A1P39059 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
COL15A1P39059 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.42■■■□□ 2.3
COL15A1P39059 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
COL15A1P39059 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.42■■■□□ 2.3
COL15A1P39059 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
COL15A1P39059 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
COL15A1P39059 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL15A1P39059 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL15A1P39059 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.41■■■□□ 2.3
COL15A1P39059 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
COL15A1P39059 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL15A1P39059 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.41■■■□□ 2.3
COL15A1P39059 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.41■■■□□ 2.3
COL15A1P39059 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.41■■■□□ 2.3
COL15A1P39059 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.41■■■□□ 2.3
COL15A1P39059 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
COL15A1P39059 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.4■■■□□ 2.3
COL15A1P39059 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
COL15A1P39059 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.39■■■□□ 2.3
COL15A1P39059 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL15A1P39059 SERBP1P1-201ENST00000396021 1160 ntBASIC29.39■■■□□ 2.3
COL15A1P39059 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL15A1P39059 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL15A1P39059 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
COL15A1P39059 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL15A1P39059 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL15A1P39059 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
COL15A1P39059 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
COL15A1P39059 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.39■■■□□ 2.29
COL15A1P39059 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
COL15A1P39059 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.39■■■□□ 2.29
COL15A1P39059 AC092171.4-201ENST00000609130 632 ntBASIC29.39■■■□□ 2.29
COL15A1P39059 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
COL15A1P39059 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC29.38■■■□□ 2.29
COL15A1P39059 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.38■■■□□ 2.29
COL15A1P39059 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.38■■■□□ 2.29
COL15A1P39059 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
COL15A1P39059 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL15A1P39059 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL15A1P39059 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.37■■■□□ 2.29
COL15A1P39059 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.37■■■□□ 2.29
COL15A1P39059 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.37■■■□□ 2.29
COL15A1P39059 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.37■■■□□ 2.29
COL15A1P39059 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL15A1P39059 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.36■■■□□ 2.29
COL15A1P39059 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
COL15A1P39059 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL15A1P39059 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.36■■■□□ 2.29
COL15A1P39059 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
COL15A1P39059 MIR6089-201ENST00000616698 64 ntBASIC29.36■■■□□ 2.29
COL15A1P39059 MIR6821-201ENST00000617625 74 ntBASIC29.36■■■□□ 2.29
COL15A1P39059 SLC6A10P-202ENST00000431994 2058 ntBASIC29.35■■■□□ 2.29
COL15A1P39059 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
COL15A1P39059 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
COL15A1P39059 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL15A1P39059 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
COL15A1P39059 CA15P2-201ENST00000611168 834 ntBASIC29.35■■■□□ 2.29
COL15A1P39059 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.35■■■□□ 2.29
COL15A1P39059 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL15A1P39059 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
COL15A1P39059 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.34■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms