Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL1A2P08123 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.47■■□□□ 1.67
COL1A2P08123 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL1A2P08123 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.46■■□□□ 1.67
COL1A2P08123 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL1A2P08123 SRD5A1P1-201ENST00000442297 786 ntBASIC25.46■■□□□ 1.67
COL1A2P08123 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.46■■□□□ 1.67
COL1A2P08123 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL1A2P08123 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.46■■□□□ 1.67
COL1A2P08123 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.45■■□□□ 1.67
COL1A2P08123 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.45■■□□□ 1.67
COL1A2P08123 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.45■■□□□ 1.67
COL1A2P08123 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
COL1A2P08123 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
COL1A2P08123 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.45■■□□□ 1.66
COL1A2P08123 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
COL1A2P08123 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.45■■□□□ 1.66
COL1A2P08123 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.45■■□□□ 1.66
COL1A2P08123 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.44■■□□□ 1.66
COL1A2P08123 HLA-L-211ENST00000482052 1765 ntBASIC25.44■■□□□ 1.66
COL1A2P08123 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.44■■□□□ 1.66
COL1A2P08123 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL1A2P08123 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.44■■□□□ 1.66
COL1A2P08123 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
COL1A2P08123 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A2P08123 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
COL1A2P08123 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A2P08123 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A2P08123 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A2P08123 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A2P08123 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
COL1A2P08123 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
COL1A2P08123 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.42■■□□□ 1.66
COL1A2P08123 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A2P08123 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
COL1A2P08123 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.42■■□□□ 1.66
COL1A2P08123 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
COL1A2P08123 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A2P08123 AC133561.4-201ENST00000566112 224 ntBASIC25.42■■□□□ 1.66
COL1A2P08123 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.42■■□□□ 1.66
COL1A2P08123 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A2P08123 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.41■■□□□ 1.66
COL1A2P08123 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A2P08123 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.41■■□□□ 1.66
COL1A2P08123 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.41■■□□□ 1.66
COL1A2P08123 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
COL1A2P08123 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A2P08123 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A2P08123 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A2P08123 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A2P08123 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A2P08123 AP003733.4-201ENST00000623785 1697 ntBASIC25.4■■□□□ 1.66
COL1A2P08123 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A2P08123 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A2P08123 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A2P08123 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.4■■□□□ 1.66
COL1A2P08123 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A2P08123 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COL1A2P08123 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL1A2P08123 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
COL1A2P08123 AC022211.4-201ENST00000625094 2161 ntBASIC25.39■■□□□ 1.66
COL1A2P08123 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL1A2P08123 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COL1A2P08123 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.39■■□□□ 1.65
COL1A2P08123 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL1A2P08123 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL1A2P08123 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A2P08123 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A2P08123 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A2P08123 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.38■■□□□ 1.65
COL1A2P08123 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A2P08123 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.38■■□□□ 1.65
COL1A2P08123 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A2P08123 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
COL1A2P08123 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.38■■□□□ 1.65
COL1A2P08123 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
COL1A2P08123 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A2P08123 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A2P08123 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.37■■□□□ 1.65
COL1A2P08123 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.37■■□□□ 1.65
COL1A2P08123 AC106739.1-201ENST00000617035 715 ntBASIC25.37■■□□□ 1.65
COL1A2P08123 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.37■■□□□ 1.65
COL1A2P08123 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A2P08123 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A2P08123 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A2P08123 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL1A2P08123 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.37■■□□□ 1.65
COL1A2P08123 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
COL1A2P08123 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.36■■□□□ 1.65
COL1A2P08123 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A2P08123 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
COL1A2P08123 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A2P08123 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms