Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX39AO00148 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX39AO00148 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.96■■□□□ 1.75
DDX39AO00148 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX39AO00148 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX39AO00148 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
DDX39AO00148 AC008406.3-201ENST00000620001 1374 ntBASIC25.95■■□□□ 1.75
DDX39AO00148 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.95■■□□□ 1.75
DDX39AO00148 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX39AO00148 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX39AO00148 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.95■■□□□ 1.74
DDX39AO00148 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.95■■□□□ 1.74
DDX39AO00148 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.95■■□□□ 1.74
DDX39AO00148 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX39AO00148 MIR6722-201ENST00000617286 78 ntBASIC25.95■■□□□ 1.74
DDX39AO00148 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX39AO00148 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX39AO00148 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.94■■□□□ 1.74
DDX39AO00148 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX39AO00148 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
DDX39AO00148 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX39AO00148 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX39AO00148 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX39AO00148 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX39AO00148 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
DDX39AO00148 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX39AO00148 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
DDX39AO00148 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
DDX39AO00148 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX39AO00148 AP003733.4-201ENST00000623785 1697 ntBASIC25.93■■□□□ 1.74
DDX39AO00148 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX39AO00148 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX39AO00148 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX39AO00148 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX39AO00148 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.93■■□□□ 1.74
DDX39AO00148 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX39AO00148 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX39AO00148 AL022069.1-201ENST00000568025 1636 ntBASIC25.92■■□□□ 1.74
DDX39AO00148 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX39AO00148 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX39AO00148 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
DDX39AO00148 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX39AO00148 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
DDX39AO00148 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.92■■□□□ 1.74
DDX39AO00148 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.92■■□□□ 1.74
DDX39AO00148 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.92■■□□□ 1.74
DDX39AO00148 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.92■■□□□ 1.74
DDX39AO00148 MIR3621-201ENST00000580529 85 ntBASIC25.92■■□□□ 1.74
DDX39AO00148 AL356740.2-201ENST00000601559 647 ntBASIC25.92■■□□□ 1.74
DDX39AO00148 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX39AO00148 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.92■■□□□ 1.74
DDX39AO00148 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX39AO00148 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
DDX39AO00148 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX39AO00148 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX39AO00148 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX39AO00148 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX39AO00148 AC131281.2-201ENST00000520478 145 ntBASIC25.91■■□□□ 1.74
DDX39AO00148 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.91■■□□□ 1.74
DDX39AO00148 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX39AO00148 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX39AO00148 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX39AO00148 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.9■■□□□ 1.74
DDX39AO00148 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX39AO00148 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
DDX39AO00148 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
DDX39AO00148 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX39AO00148 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX39AO00148 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
DDX39AO00148 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
DDX39AO00148 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.88■■□□□ 1.73
DDX39AO00148 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX39AO00148 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX39AO00148 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX39AO00148 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.87■■□□□ 1.73
DDX39AO00148 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX39AO00148 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
DDX39AO00148 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX39AO00148 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX39AO00148 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX39AO00148 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX39AO00148 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.86■■□□□ 1.73
DDX39AO00148 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX39AO00148 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX39AO00148 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX39AO00148 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX39AO00148 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
DDX39AO00148 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX39AO00148 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX39AO00148 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
DDX39AO00148 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX39AO00148 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.85■■□□□ 1.73
DDX39AO00148 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
DDX39AO00148 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX39AO00148 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX39AO00148 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
DDX39AO00148 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX39AO00148 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX39AO00148 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX39AO00148 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms