Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)6.62□□□□□ -1.358e-8■□□□□ 8.6
RPS3P23396 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.378e-8■□□□□ 8.6
RPS3P23396 EIF4A2-211ENST00000465222 676 ntTSL 26.27□□□□□ -1.418e-8■□□□□ 8.6
RPS3P23396 EIF4A2-202ENST00000425053 1977 ntTSL 55.7□□□□□ -1.58e-8■□□□□ 8.6
RPS3P23396 EIF4A2-218ENST00000475653 909 ntTSL 25.61□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-204ENST00000429589 1005 ntTSL 55.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-210ENST00000465032 578 ntTSL 25.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-212ENST00000465267 1054 ntTSL 25.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-224ENST00000495049 576 ntTSL 25.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-221ENST00000491473 579 ntTSL 25.54□□□□□ -1.528e-8■□□□□ 8.6
RPS3P23396 EIF4A2-219ENST00000485101 5327 ntTSL 54.14□□□□□ -1.758e-8■□□□□ 8.6
RPS3P23396 EIF4A2-220ENST00000486805 590 ntTSL 22.97□□□□□ -1.938e-8■□□□□ 8.6
RPS3P23396 SNRPF-202ENST00000549580 757 ntTSL 21.55□□□□□ -2.168e-8■□□□□ 8.6
RPS3P23396 LRP1-212ENST00000556830 1847 ntTSL 212.29□□□□□ -0.445e-16■□□□□ 8.6
RPS3P23396 FASN-210ENST00000636968 100 ntTSL 516.24■□□□□ 0.193e-21■□□□□ 8.6
RPS3P23396 FASN-211ENST00000637026 100 ntTSL 59.27□□□□□ -0.933e-21■□□□□ 8.6
RPS3P23396 FASN-208ENST00000635733 100 ntTSL 58.42□□□□□ -1.063e-21■□□□□ 8.6
RPS3P23396 ATP5I-202ENST00000505852 300 ntTSL 29.59□□□□□ -0.871e-7■□□□□ 8.6
RPS3P23396 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -11e-7■□□□□ 8.6
RPS3P23396 PCSK6-211ENST00000559605 379 ntTSL 38.45□□□□□ -1.061e-7■□□□□ 8.6
RPS3P23396 PCSK6-213ENST00000560902 501 ntTSL 47.7□□□□□ -1.181e-7■□□□□ 8.6
RPS3P23396 SRSF1-206ENST00000583741 1465 ntTSL 519.46■□□□□ 0.712e-6■□□□□ 8.6
RPS3P23396 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.29■□□□□ 0.362e-6■□□□□ 8.6
RPS3P23396 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.352e-6■□□□□ 8.6
RPS3P23396 PSMD11-207ENST00000578397 1178 ntTSL 213.44□□□□□ -0.262e-9■□□□□ 8.6
RPS3P23396 SRSF1-202ENST00000578430 689 ntTSL 213.32□□□□□ -0.282e-6■□□□□ 8.6
RPS3P23396 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.831e-15■□□□□ 8.6
RPS3P23396 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)20.13■□□□□ 0.811e-15■□□□□ 8.6
RPS3P23396 SPCS3-203ENST00000507678 2655 ntTSL 221.6■■□□□ 1.052e-7■□□□□ 8.5
RPS3P23396 VEGFA-217ENST00000518538 535 ntTSL 221.52■■□□□ 1.042e-7■□□□□ 8.5
RPS3P23396 CRELD2-205ENST00000444954 598 ntTSL 319.21■□□□□ 0.672e-7■□□□□ 8.5
RPS3P23396 SAFB-213ENST00000592555 1360 ntTSL 518.21■□□□□ 0.512e-7■□□□□ 8.5
RPS3P23396 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.8■□□□□ 0.442e-7■□□□□ 8.5
RPS3P23396 CRELD2-207ENST00000462253 471 ntTSL 517.31■□□□□ 0.362e-7■□□□□ 8.5
RPS3P23396 WSB1-206ENST00000578312 692 ntTSL 415.05■□□□□ -02e-7■□□□□ 8.5
RPS3P23396 WSB1-214ENST00000583742 544 ntTSL 415.05■□□□□ -02e-7■□□□□ 8.5
RPS3P23396 WSB1-217ENST00000584354 544 ntTSL 214.76□□□□□ -0.052e-7■□□□□ 8.5
RPS3P23396 SPCS3-204ENST00000513139 589 ntTSL 213.06□□□□□ -0.322e-7■□□□□ 8.5
RPS3P23396 SPTAN1-208ENST00000491712 714 ntTSL 213□□□□□ -0.332e-7■□□□□ 8.5
RPS3P23396 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC12.33□□□□□ -0.432e-7■□□□□ 8.5
RPS3P23396 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC12.22□□□□□ -0.452e-7■□□□□ 8.5
RPS3P23396 SAFB-210ENST00000591991 3471 ntTSL 211.6□□□□□ -0.552e-7■□□□□ 8.5
RPS3P23396 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC11.53□□□□□ -0.562e-7■□□□□ 8.5
RPS3P23396 WSB1-213ENST00000583193 552 ntTSL 4 BASIC11.53□□□□□ -0.562e-7■□□□□ 8.5
RPS3P23396 WSB1-215ENST00000583786 481 ntTSL 511.3□□□□□ -0.62e-7■□□□□ 8.5
RPS3P23396 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC10.52□□□□□ -0.732e-7■□□□□ 8.5
RPS3P23396 CLPTM1-207ENST00000587537 737 ntTSL 210.27□□□□□ -0.772e-7■□□□□ 8.5
RPS3P23396 WSB1-208ENST00000581089 697 ntTSL 210.12□□□□□ -0.792e-7■□□□□ 8.5
RPS3P23396 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.812e-7■□□□□ 8.5
RPS3P23396 WSB1-211ENST00000582208 625 ntTSL 39.73□□□□□ -0.852e-7■□□□□ 8.5
RPS3P23396 WSB1-210ENST00000581440 943 ntTSL 39.52□□□□□ -0.892e-7■□□□□ 8.5
RPS3P23396 MIR671-201ENST00000390183 118 ntBASIC9.3□□□□□ -0.922e-7■□□□□ 8.5
RPS3P23396 WSB1-204ENST00000467843 4187 ntTSL 1 (best)8.46□□□□□ -1.052e-7■□□□□ 8.5
RPS3P23396 GRB2-211ENST00000583912 561 ntTSL 48.46□□□□□ -1.062e-7■□□□□ 8.5
RPS3P23396 SPTAN1-238ENST00000637903 574 ntTSL 58.03□□□□□ -1.122e-7■□□□□ 8.5
RPS3P23396 ATP6AP2-223ENST00000637165 534 ntTSL 52.82□□□□□ -1.962e-7■□□□□ 8.5
RPS3P23396 P3H1-205ENST00000431412 836 ntTSL 59.02□□□□□ -0.971e-7■□□□□ 8.5
RPS3P23396 OCIAD1-211ENST00000507210 582 ntTSL 314.93□□□□□ -0.023e-8■□□□□ 8.5
RPS3P23396 OCIAD1-220ENST00000509963 432 ntTSL 212.85□□□□□ -0.353e-8■□□□□ 8.5
RPS3P23396 OCIAD1-228ENST00000514981 653 ntTSL 311.15□□□□□ -0.623e-8■□□□□ 8.5
RPS3P23396 OCIAD1-224ENST00000512236 594 ntTSL 39.03□□□□□ -0.963e-8■□□□□ 8.5
RPS3P23396 OCIAD1-225ENST00000512981 1209 ntTSL 48.98□□□□□ -0.973e-8■□□□□ 8.5
RPS3P23396 OCIAD1-221ENST00000510824 582 ntTSL 38.92□□□□□ -0.983e-8■□□□□ 8.5
RPS3P23396 OCIAD1-209ENST00000505922 555 ntTSL 57.13□□□□□ -1.273e-8■□□□□ 8.5
RPS3P23396 OCIAD1-207ENST00000503016 720 ntTSL 34.31□□□□□ -1.723e-8■□□□□ 8.5
RPS3P23396 OCIAD1-218ENST00000509246 495 ntTSL 23.85□□□□□ -1.793e-8■□□□□ 8.5
RPS3P23396 OCIAD1-208ENST00000504654 552 ntTSL 32.68□□□□□ -1.983e-8■□□□□ 8.5
RPS3P23396 OCIAD1-222ENST00000511102 688 ntTSL 22.68□□□□□ -1.983e-8■□□□□ 8.5
RPS3P23396 NFE2L1-206ENST00000577431 583 ntTSL 517.93■□□□□ 0.463e-8■□□□□ 8.5
RPS3P23396 NFE2L1-211ENST00000580050 476 ntTSL 417.93■□□□□ 0.463e-8■□□□□ 8.5
RPS3P23396 LGMN-214ENST00000557034 565 ntTSL 415.88■□□□□ 0.139e-13■□□□□ 8.5
RPS3P23396 P3H1-212ENST00000481465 728 ntTSL 210.84□□□□□ -0.679e-13■□□□□ 8.5
RPS3P23396 P3H1-206ENST00000447502 453 ntTSL 39.02□□□□□ -0.979e-13■□□□□ 8.5
RPS3P23396 STRN3-207ENST00000555358 2208 ntTSL 1 (best)23■■□□□ 1.271e-13■□□□□ 8.5
RPS3P23396 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.471e-13■□□□□ 8.5
RPS3P23396 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.47□□□□□ -0.091e-13■□□□□ 8.5
RPS3P23396 RPS8-206ENST00000484599 852 ntTSL 311.09□□□□□ -0.632e-11■□□□□ 8.5
RPS3P23396 RPS8-205ENST00000474582 391 ntTSL 1 (best)11.02□□□□□ -0.652e-11■□□□□ 8.5
RPS3P23396 RPS8-203ENST00000464658 898 ntTSL 28.8□□□□□ -12e-11■□□□□ 8.5
RPS3P23396 UBAP2L-212ENST00000465855 684 ntTSL 39.97□□□□□ -0.815e-6■□□□□ 8.5
RPS3P23396 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.58□□□□□ -1.045e-6■□□□□ 8.5
RPS3P23396 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.44□□□□□ -1.065e-6■□□□□ 8.5
RPS3P23396 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.245e-7■□□□□ 8.4
RPS3P23396 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.23■■□□□ 1.955e-7■□□□□ 8.4
RPS3P23396 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.6■■□□□ 1.855e-7■□□□□ 8.4
RPS3P23396 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.735e-7■□□□□ 8.4
RPS3P23396 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.93■■□□□ 1.265e-7■□□□□ 8.4
RPS3P23396 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 15e-7■□□□□ 8.4
RPS3P23396 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.835e-7■□□□□ 8.4
RPS3P23396 U2AF2-204ENST00000587275 554 ntTSL 419.23■□□□□ 0.675e-7■□□□□ 8.4
RPS3P23396 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.65e-7■□□□□ 8.4
RPS3P23396 RFK-204ENST00000479197 1501 ntTSL 1 (best)17.67■□□□□ 0.425e-7■□□□□ 8.4
RPS3P23396 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.23■□□□□ 0.355e-7■□□□□ 8.4
RPS3P23396 RFK-202ENST00000472900 753 ntTSL 317.09■□□□□ 0.335e-7■□□□□ 8.4
RPS3P23396 SLC25A39-215ENST00000592372 867 ntTSL 316.38■□□□□ 0.215e-7■□□□□ 8.4
RPS3P23396 CD55-202ENST00000343420 978 ntTSL 516.36■□□□□ 0.215e-7■□□□□ 8.4
RPS3P23396 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.195e-7■□□□□ 8.4
RPS3P23396 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.025e-7■□□□□ 8.4
RPS3P23396 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.82□□□□□ -0.045e-7■□□□□ 8.4
RPS3P23396 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.72□□□□□ -0.055e-7■□□□□ 8.4
Retrieved 100 of 24,271 protein–RNA pairs in 461 ms