RNA–Protein interactions for RNA: ENST00000557034.1

LGMN-214, Transcript of legumain, humanhuman

TSL 4

Gene LGMN, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-214ENST00000557034 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
LGMN-214ENST00000557034 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
LGMN-214ENST00000557034 ABCC9O60706 1549 aa35.19■■■■□ 3.22
LGMN-214ENST00000557034 RB1CC1Q8TDY2 1594 aa33.74■■■□□ 2.99
LGMN-214ENST00000557034 DCAF8L2P0C7V8 631 aa33.66■■■□□ 2.98
LGMN-214ENST00000557034 NACADO15069 1562 aa33.6■■■□□ 2.97
LGMN-214ENST00000557034 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
LGMN-214ENST00000557034 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
LGMN-214ENST00000557034 UNC13AQ9UPW8 1703 aa33.14■■■□□ 2.89
LGMN-214ENST00000557034 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
LGMN-214ENST00000557034 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
LGMN-214ENST00000557034 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.82
LGMN-214ENST00000557034 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
LGMN-214ENST00000557034 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
LGMN-214ENST00000557034 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
LGMN-214ENST00000557034 EIF4G1Q04637 1599 aaKnown RBP31.87■■■□□ 2.69
LGMN-214ENST00000557034 CC2D2AQ9P2K1 1620 aa31.84■■■□□ 2.69
LGMN-214ENST00000557034 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
LGMN-214ENST00000557034 SMARCA4P51532 1647 aa31.18■■■□□ 2.58
LGMN-214ENST00000557034 BAZ1AQ9NRL2 1556 aaPredicted RBP31.08■■■□□ 2.57
LGMN-214ENST00000557034 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
LGMN-214ENST00000557034 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
LGMN-214ENST00000557034 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
LGMN-214ENST00000557034 MROH2BQ7Z745 1585 aa30.89■■■□□ 2.54
LGMN-214ENST00000557034 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
LGMN-214ENST00000557034 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
LGMN-214ENST00000557034 BAZ1BQ9UIG0 1483 aaKnown RBP30.77■■■□□ 2.52
LGMN-214ENST00000557034 WIZO95785 1651 aa30.65■■■□□ 2.5
LGMN-214ENST00000557034 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
LGMN-214ENST00000557034 NESP48681 1621 aa30.39■■■□□ 2.46
LGMN-214ENST00000557034 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
LGMN-214ENST00000557034 LAMC3Q9Y6N6 1575 aa30.26■■■□□ 2.43
LGMN-214ENST00000557034 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
LGMN-214ENST00000557034 KIF21AQ7Z4S6 1674 aa30.14■■■□□ 2.41
LGMN-214ENST00000557034 CADPSQ9ULU8 1353 aa30.05■■■□□ 2.4
LGMN-214ENST00000557034 CUX2O14529 1486 aa30.01■■■□□ 2.4
LGMN-214ENST00000557034 PDS5BQ9NTI5 1447 aa30.01■■■□□ 2.39
LGMN-214ENST00000557034 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
LGMN-214ENST00000557034 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
LGMN-214ENST00000557034 PRDM2Q13029 1718 aa29.84■■■□□ 2.37
LGMN-214ENST00000557034 CFTRP13569 1480 aa29.83■■■□□ 2.37
LGMN-214ENST00000557034 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
LGMN-214ENST00000557034 FANCD2Q9BXW9 1451 aa29.77■■■□□ 2.36
LGMN-214ENST00000557034 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
LGMN-214ENST00000557034 WDR62O43379 1518 aa29.66■■■□□ 2.34
LGMN-214ENST00000557034 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
LGMN-214ENST00000557034 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
LGMN-214ENST00000557034 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
LGMN-214ENST00000557034 TOPBP1Q92547 1522 aa29.28■■■□□ 2.28
LGMN-214ENST00000557034 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.27
LGMN-214ENST00000557034 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
LGMN-214ENST00000557034 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
LGMN-214ENST00000557034 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
LGMN-214ENST00000557034 CUX1P39880 1505 aa29■■■□□ 2.23
LGMN-214ENST00000557034 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
LGMN-214ENST00000557034 TARBP1Q13395 1621 aaKnown RBP28.99■■■□□ 2.23
LGMN-214ENST00000557034 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
LGMN-214ENST00000557034 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
LGMN-214ENST00000557034 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
LGMN-214ENST00000557034 SOGA1O94964 1423 aa28.88■■■□□ 2.21
LGMN-214ENST00000557034 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
LGMN-214ENST00000557034 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
LGMN-214ENST00000557034 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
LGMN-214ENST00000557034 CHD1O14646 1710 aa28.74■■■□□ 2.19
LGMN-214ENST00000557034 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
LGMN-214ENST00000557034 OSCARQ8IYS5 282 aa28.73■■■□□ 2.19
LGMN-214ENST00000557034 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
LGMN-214ENST00000557034 WRNQ14191 1432 aaPredicted RBP eCLIP28.72■■■□□ 2.19
LGMN-214ENST00000557034 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
LGMN-214ENST00000557034 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
LGMN-214ENST00000557034 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
LGMN-214ENST00000557034 FBLN2P98095 1184 aa28.6■■■□□ 2.17
LGMN-214ENST00000557034 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
LGMN-214ENST00000557034 ABCA5Q8WWZ7 1642 aa28.57■■■□□ 2.16
LGMN-214ENST00000557034 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
LGMN-214ENST00000557034 GAPVD1Q14C86 1478 aa28.56■■■□□ 2.16
LGMN-214ENST00000557034 MAGI1Q96QZ7 1491 aaPredicted RBP28.5■■■□□ 2.15
LGMN-214ENST00000557034 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
LGMN-214ENST00000557034 RIMBP3CA6NJZ7 1639 aa28.42■■■□□ 2.14
LGMN-214ENST00000557034 RIMBP3BA6NNM3 1639 aa28.42■■■□□ 2.14
LGMN-214ENST00000557034 RIMBP3Q9UFD9 1639 aa28.42■■■□□ 2.14
LGMN-214ENST00000557034 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
LGMN-214ENST00000557034 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
LGMN-214ENST00000557034 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
LGMN-214ENST00000557034 ADAMTS12P58397 1594 aa28.33■■■□□ 2.12
LGMN-214ENST00000557034 ERICH3Q5RHP9 1530 aa28.27■■■□□ 2.12
LGMN-214ENST00000557034 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
LGMN-214ENST00000557034 GRIN2AQ12879 1464 aa28.21■■■□□ 2.11
LGMN-214ENST00000557034 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
LGMN-214ENST00000557034 CEP170Q5SW79 1584 aa28.12■■■□□ 2.09
LGMN-214ENST00000557034 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
LGMN-214ENST00000557034 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
LGMN-214ENST00000557034 ARAP1Q96P48 1450 aa28.07■■■□□ 2.08
LGMN-214ENST00000557034 CUL7Q14999 1698 aa28.06■■■□□ 2.08
LGMN-214ENST00000557034 NUP160Q12769 1436 aa28.03■■■□□ 2.08
LGMN-214ENST00000557034 IGF1RP08069 1367 aa27.98■■■□□ 2.07
LGMN-214ENST00000557034 ERCC6L2Q5T890 1561 aa27.92■■■□□ 2.06
LGMN-214ENST00000557034 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
LGMN-214ENST00000557034 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
LGMN-214ENST00000557034 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms