RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
TRIM11-201ENST00000284551 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
TRIM11-201ENST00000284551 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.3
TRIM11-201ENST00000284551 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.29
TRIM11-201ENST00000284551 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
TRIM11-201ENST00000284551 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
TRIM11-201ENST00000284551 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
TRIM11-201ENST00000284551 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
TRIM11-201ENST00000284551 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.12
TRIM11-201ENST00000284551 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
TRIM11-201ENST00000284551 ABCC9O60706 1549 aa27.79■■■□□ 2.04
TRIM11-201ENST00000284551 LOC105371045A0A1W2PR82 267 aa27.63■■■□□ 2.01
TRIM11-201ENST00000284551 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
TRIM11-201ENST00000284551 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
TRIM11-201ENST00000284551 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
TRIM11-201ENST00000284551 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
TRIM11-201ENST00000284551 NACADO15069 1562 aa27.29■■□□□ 1.96
TRIM11-201ENST00000284551 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
TRIM11-201ENST00000284551 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
TRIM11-201ENST00000284551 HRCP23327 699 aa27.13■■□□□ 1.93
TRIM11-201ENST00000284551 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
TRIM11-201ENST00000284551 EHMT2Q96KQ7 1210 aa27.1■■□□□ 1.93
TRIM11-201ENST00000284551 WIZO95785 1651 aa27.05■■□□□ 1.92
TRIM11-201ENST00000284551 PPARGC1BQ86YN6 1023 aaKnown RBP26.92■■□□□ 1.9
TRIM11-201ENST00000284551 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.87
TRIM11-201ENST00000284551 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
TRIM11-201ENST00000284551 BAZ1AQ9NRL2 1556 aaPredicted RBP26.68■■□□□ 1.86
TRIM11-201ENST00000284551 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
TRIM11-201ENST00000284551 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
TRIM11-201ENST00000284551 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
TRIM11-201ENST00000284551 ABCC8Q09428 1581 aa26.47■■□□□ 1.83
TRIM11-201ENST00000284551 CCDC88BA6NC98 1476 aa26.46■■□□□ 1.83
TRIM11-201ENST00000284551 TOP2AP11388 1531 aaKnown RBP26.43■■□□□ 1.82
TRIM11-201ENST00000284551 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
TRIM11-201ENST00000284551 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
TRIM11-201ENST00000284551 SOGA1O94964 1423 aa26.19■■□□□ 1.78
TRIM11-201ENST00000284551 TTBK1Q5TCY1 1321 aaPredicted RBP26.15■■□□□ 1.78
TRIM11-201ENST00000284551 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
TRIM11-201ENST00000284551 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
TRIM11-201ENST00000284551 CSRNP3Q8WYN3 585 aa25.91■■□□□ 1.74
TRIM11-201ENST00000284551 UBTFP17480 764 aaKnown RBP25.89■■□□□ 1.74
TRIM11-201ENST00000284551 CEP162Q5TB80 1403 aa25.89■■□□□ 1.74
TRIM11-201ENST00000284551 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
TRIM11-201ENST00000284551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
TRIM11-201ENST00000284551 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
TRIM11-201ENST00000284551 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
TRIM11-201ENST00000284551 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
TRIM11-201ENST00000284551 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
TRIM11-201ENST00000284551 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
TRIM11-201ENST00000284551 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
TRIM11-201ENST00000284551 CCER1Q8TC90 406 aaPredicted RBP25.65■■□□□ 1.7
TRIM11-201ENST00000284551 EEA1Q15075 1411 aa25.65■■□□□ 1.7
TRIM11-201ENST00000284551 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
TRIM11-201ENST00000284551 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
TRIM11-201ENST00000284551 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
TRIM11-201ENST00000284551 CLIP1P30622 1438 aa25.42■■□□□ 1.66
TRIM11-201ENST00000284551 KIF21BO75037 1637 aa25.41■■□□□ 1.66
TRIM11-201ENST00000284551 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
TRIM11-201ENST00000284551 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
TRIM11-201ENST00000284551 NCAPD3P42695 1498 aa25.33■■□□□ 1.65
TRIM11-201ENST00000284551 CUX1P39880 1505 aa25.28■■□□□ 1.64
TRIM11-201ENST00000284551 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
TRIM11-201ENST00000284551 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
TRIM11-201ENST00000284551 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
TRIM11-201ENST00000284551 CFTRP13569 1480 aa25.14■■□□□ 1.62
TRIM11-201ENST00000284551 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
TRIM11-201ENST00000284551 APLP2Q06481 763 aa25.13■■□□□ 1.61
TRIM11-201ENST00000284551 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
TRIM11-201ENST00000284551 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
TRIM11-201ENST00000284551 PELP1Q8IZL8 1130 aaKnown RBP25.06■■□□□ 1.6
TRIM11-201ENST00000284551 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
TRIM11-201ENST00000284551 DIEXFQ68CQ4 756 aaKnown RBP25.05■■□□□ 1.6
TRIM11-201ENST00000284551 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
TRIM11-201ENST00000284551 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
TRIM11-201ENST00000284551 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
TRIM11-201ENST00000284551 CUX2O14529 1486 aa24.93■■□□□ 1.58
TRIM11-201ENST00000284551 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
TRIM11-201ENST00000284551 IGF1RP08069 1367 aa24.86■■□□□ 1.57
TRIM11-201ENST00000284551 ARHGAP35Q9NRY4 1499 aa24.86■■□□□ 1.57
TRIM11-201ENST00000284551 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
TRIM11-201ENST00000284551 ZNF316A6NFI3 1004 aaPredicted RBP24.85■■□□□ 1.57
TRIM11-201ENST00000284551 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
TRIM11-201ENST00000284551 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
TRIM11-201ENST00000284551 ITGAEP38570 1179 aa24.79■■□□□ 1.56
TRIM11-201ENST00000284551 NESP48681 1621 aa24.77■■□□□ 1.56
TRIM11-201ENST00000284551 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
TRIM11-201ENST00000284551 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
TRIM11-201ENST00000284551 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
TRIM11-201ENST00000284551 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
TRIM11-201ENST00000284551 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
TRIM11-201ENST00000284551 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
TRIM11-201ENST00000284551 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
TRIM11-201ENST00000284551 YTHDC1Q96MU7 727 aaKnown RBP24.66■■□□□ 1.54
TRIM11-201ENST00000284551 MIER1Q8N108 512 aa24.64■■□□□ 1.53
TRIM11-201ENST00000284551 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
TRIM11-201ENST00000284551 RRBP1Q9P2E9 1410 aaKnown RBP24.6■■□□□ 1.53
TRIM11-201ENST00000284551 CCNB3Q8WWL7 1395 aa24.57■■□□□ 1.52
TRIM11-201ENST00000284551 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
TRIM11-201ENST00000284551 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
TRIM11-201ENST00000284551 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms